A test-bed for facebook friend-list recommendations. - Ziyou Wu; Isabella Huang; Xubin Zheng; Jacob W. Bartel; Andrew Vitkus; Prasun Dewan (EICS, 2015)

Drug2vec: A Drug Embedding Method with Drug-Drug Interaction as the Context. - Pengfei Liu; Xubin Zheng; Man Hon Wong 001; Kwong-Sak Leung (EANN, 2020)

Improving bulk RNA-seq classification by transferring gene signature from single cells in acute myeloid leukemia. - Ran Wang; Xubin Zheng; Jun Wang; Shibiao Wan; Fangda Song; Man Hon Wong 001; Kwong-Sak Leung; Lixin Cheng (Briefings Bioinform., 2022)

meGPS: a multi-omics signature for hepatocellular carcinoma detection integrating methylome and transcriptome data. - Qiong Wu; Xubin Zheng; Kwong-Sak Leung; Man Hon Wong 001; Stephen Kwok-Wing Tsui; Lixin Cheng (Bioinform., 2022)

Whole transcriptome analysis reveals non-coding RNA's competing endogenous gene pairs as novel form of motifs in serous ovarian cancer. - Haili Li; Xubin Zheng; Jing Gao; Kwong-Sak Leung; Man Hon Wong 001; Shu Yang; Yakun Liu; Ming Dong; Huimin Bai; Xiufeng Ye; Lixin Cheng (Comput. Biol. Medicine, 2022)

Singular value decomposition-based behavior-aware cloud service application programming interfaces recommendation for large-scale software cloud directory platforms. - Lei Wang 042; Yunqiu Zhang; Xubin Zheng; Qi Yu 001; Shuhan Chen; Junyao Ding (Concurr. Comput. Pract. Exp., 2022)

A Robust and Generalizable Immune-Related Signature for Sepsis Diagnostics. - Yueran Yang; Yu Zhang 151; Shuai Li 010; Xubin Zheng; Man Hon Wong 001; Kwong-Sak Leung; Lixin Cheng (IEEE ACM Trans. Comput. Biol. Bioinform., 2022)

GPGPS: a robust prognostic gene pair signature of glioma ensembling IDH mutation and 1p/19q co-deletion. - Lixin Cheng; Haonan Wu; Xubin Zheng; Ning Zhang; Pengfei Zhao; Ran Wang; Qiong Wu; Tao Liu; Xiaojun Yang; Qingshan Geng (Bioinform., 2023)

bvnGPS: a generalizable diagnostic model for acute bacterial and viral infection using integrative host transcriptomics and pretrained neural networks. - Qizhi Li; Xubin Zheng; Jize Xie; Ran Wang; Mengyao Li; Man Hon Wong 001; Kwong-Sak Leung; Shuai Li 010; Qingshan Geng; Lixin Cheng (Bioinform., 2023)

Deciphering associations between gut microbiota and clinical factors using microbial modules. - Ran Wang; Xubin Zheng; Fangda Song; Man Hon Wong 001; Kwong-Sak Leung; Lixin Cheng (Bioinform., 2023)

A Wireless Facemask for Ultrafast and Continuous Tracking of Breath CO2 Patterns. - Xubin Zheng; Qingpeng Cao; Di Wang (IEEE SENSORS, 2024)

Diagnostic Prediction of portal vein thrombosis in chronic cirrhosis patients using data-driven precision medicine model. - Ying Li; Jing Gao; Xubin Zheng; Guole Nie; Jican Qin; Haiping Wang; Tao He; Åsa M. Wheelock; Chuan-Xing Li; Lixin Cheng; Xun Li (Briefings Bioinform., 2024)

scMMAE: masked cross-attention network for single-cell multimodal omics fusion to enhance unimodal omics. - Dian Meng; Yu Feng; Kaishen Yuan; Zitong Yu; Qin Cao; Lixin Cheng; Xubin Zheng (Briefings Bioinform., 2024)

Intra-sample reversed pairs based on differentially ranked genes reveal biosignature for ovarian cancer. - Pengfei Zhao; Dian Meng; Zunkai Hu; Yining Liang; Yating Feng; Tongjie Sun; Lixin Cheng; Xubin Zheng; Haili Li (Comput. Biol. Medicine, 2024)

FusionMamba: Dynamic Feature Enhancement for Multimodal Image Fusion with Mamba. - Xinyu Xie; Yawen Cui; Chio-In Ieong; Tao Tan; Xiaozhi Zhang; Xubin Zheng; Zitong Yu (CoRR, 2024)

scFusionTTT: Single-cell transcriptomics and proteomics fusion with Test-Time Training layers. - Dian Meng; Bohao Xing; Xinlei Huang; Yanran Liu; Yijun Zhou; Yongjun xiao; Zitong Yu; Xubin Zheng (CoRR, 2024)

scCaT: An explainable capsulating architecture for sepsis diagnosis transferring from single-cell RNA sequencing. - Xubin Zheng; Dian Meng; Duo Chen; Wan-Ki Wong; Ka-Ho To; Lei Zhu 016; Jiafei Wu; Yining Liang; Kwong-Sak Leung; Man Hon Wong 001; Lixin Cheng (PLoS Comput. Biol., 2024)

FusionMamba: dynamic feature enhancement for multimodal image fusion with Mamba. - Xinyu Xie; Yawen Cui; Tao Tan; Xubin Zheng; Zitong Yu (Vis. Intell., 2024)

PRAGA: Prototype-aware Graph Adaptive Aggregation for Spatial Multi-modal Omics Analysis. - Xinlei Huang; Zhiqi Ma; Dian Meng; Yanran Liu; Shiwei Ruan; Qingqiang Sun; Xubin Zheng; Ziyue Qiao (AAAI, 2025)

Single-View Graph Contrastive Learning with Soft Neighborhood Awareness. - Qingqiang Sun; Chaoqi Chen; Ziyue Qiao; Xubin Zheng; Kai Wang (AAAI, 2025)

Learn from Balance: Rectifying Knowledge Transfer for Long-Tailed Scenarios. - Xinlei Huang; Jialiang Tang; Xubin Zheng; Jinjia Zhou; Wenxin Yu 001; Ning Jiang 002 (ICASSP, 2025)

Pan-infection Foundation Framework Enables Multiple Pathogen Prediction. - Lingrui Zhang; Haonan Wu; Nana Jin; Chenqing Zheng; Jize Xie; Qitai Cai; Jun Wang; Qin Cao; Xubin Zheng; Jiankun Wang 001; Lixin Cheng (CoRR, 2025)

Out-of-Distribution Graph Models Merging. - Yidi Wang; Jiawei Gu; Xiaobing Pei; Xubin Zheng; Xiao Luo 001; Pengyang Wang; Ziyue Qiao (CoRR, 2025)