Sigflow: an automated and comprehensive pipeline for cancer genome mutational signature analysis. - Shixiang Wang; Ziyu Tao; Tao Wu; Xue-Song Liu (Bioinform., 2021)

Hiplot: a comprehensive and easy-to-use web service for boosting publication-ready biomedical data visualization. - Jianfeng Li; Benben Miao; Shixiang Wang; Wei Dong; Houshi Xu; Chenchen Si; Wei Wang; Songqi Duan; Jiacheng Lou; Zhiwei Bao; Hailuan Zeng; Zengzeng Yang; et al. (Briefings Bioinform., 2022)

UCSCXenaShiny: an R/CRAN package for interactive analysis of UCSC Xena data. - Shixiang Wang; Yi Xiong; Longfei Zhao; Kai Gu; Yin Li; Fei Zhao; Jianfeng Li; Mingjie Wang; Haitao Wang; Ziyu Tao; Tao Wu; Yichao Zheng; et al. (Bioinform., 2022)

Neodb: a comprehensive neoantigen database and discovery platform for cancer immunotherapy. - Tao Wu; Jing Chen; Kaixuan Diao; Guangshuai Wang; Jinyu Wang; Huizi Yao; Xue-Song Liu (Database J. Biol. Databases Curation, 2023)

The repertoire of copy number alteration signatures in human cancer. - Ziyu Tao; Shixiang Wang; Chenxu Wu; Tao Wu; Xiangyu Zhao; Wei Ning; Guangshuai Wang; Jinyu Wang; Jing Chen; Kaixuan Diao; Fuxiang Chen; Xue-Song Liu (Briefings Bioinform., 2023)

TLimmuno2: predicting MHC class II antigen immunogenicity through transfer learning. - Guangshuai Wang; Tao Wu; Wei Ning; Kaixuan Diao; Xiaoqin Sun; Jinyu Wang; Chenxu Wu; Jing Chen; Dongliang Xu; Xue-Song Liu (Briefings Bioinform., 2023)