DeepSDM: Boundary-aware pneumothorax segmentation in chest X-ray images. - Yunpeng Wang; Kang Wang; Xueqing Peng; Lili Shi; Jing Sun; Shibao Zheng; Fei Shan; Weiya Shi; Lei Liu (Neurocomputing, 2021)

Development of a Natural Language Processing Tool to Extract Acupuncture Point Location Terms. - Yiming Li; Xueqing Peng; Jianfu Li; Suyuan Peng; Donghong Pei; Cui Tao; Hua Xu 001; Na Hong (ICHI, 2023)

Zero-shot Clinical Entity Recognition using ChatGPT. - Yan Hu; Iqra Ameer; Xu Zuo; Xueqing Peng; Yujia Zhou 003; Zehan Li; Yiming Li; Jianfu Li; Xiaoqian Jiang; Hua Xu 001 (CoRR, 2023)

Large language models in biomedical natural language processing: benchmarks, baselines, and recommendations. - Qingyu Chen 001; Jingcheng Du; Yan Hu; Vipina Kuttichi Keloth; Xueqing Peng; Kalpana Raja; Rui Zhang 028; Zhiyong Lu; Hua Xu 001 (CoRR, 2023)

Specific network information gain for detecting the critical state of colorectal cancer based on gut microbiome. - Xueqing Peng; Rong Gao; Jing Ren; Jianbo Lu; Xu Ma; Peiluan Li (Briefings Bioinform., 2024)

Me LLaMA: Foundation Large Language Models for Medical Applications. - Qianqian Xie; Qingyu Chen 001; Aokun Chen; Cheng Peng 009; Yan Hu; Fongci Lin; Xueqing Peng; Jimin Huang; Jeffrey Zhang 010; Vipina Kuttichi Keloth; Xingyu Zhou; Huan He; et al. (CoRR, 2024)

Information Extraction from Clinical Notes: Are We Ready to Switch to Large Language Models? - Yan Hu; Xu Zuo; Yujia Zhou 003; Xueqing Peng; Jimin Huang; Vipina Kuttichi Keloth; Vincent J. Zhang; Ruey-Ling Weng; Qingyu Chen 001; Xiaoqian Jiang; Kirk E. Roberts; Hua Xu 001 (CoRR, 2024)

INVESTORBENCH: A Benchmark for Financial Decision-Making Tasks with LLM-based Agent. - Haohang Li; Yupeng Cao; Yangyang Yu; Shashidhar Reddy Javaji; Zhiyang Deng; Yueru He; Yuechen Jiang; Zining Zhu 005; Koduvayur Subbalakshmi; Guojun Xiong; Jimin Huang; Lingfei Qian; et al. (CoRR, 2024)

Improving large language models for clinical named entity recognition via prompt engineering. - Yan Hu; Qingyu Chen 001; Jingcheng Du; Xueqing Peng; Vipina Kuttichi Keloth; Xu Zuo; Yujia Zhou 003; Zehan Li; Xiaoqian Jiang; Zhiyong Lu; Kirk Roberts; Hua Xu 001 (J. Am. Medical Informatics Assoc., 2024)

Relation extraction using large language models: a case study on acupuncture point locations. - Yiming Li; Xueqing Peng; Jianfu Li; Xu Zuo; Suyuan Peng; Donghong Pei; Cui Tao; Hua Xu 001; Na Hong (J. Am. Medical Informatics Assoc., 2024)

MIWE: detecting the critical states of complex biological systems by the mutual information weighted entropy. - Yuke Xie; Xueqing Peng; Peiluan Li (BMC Bioinform., 2024)

INVESTORBENCH: A Benchmark for Financial Decision-Making Tasks with LLM-based Agent. - Haohang Li; Yupeng Cao; Yangyang Yu; Shashidhar Reddy Javaji; Zhiyang Deng; Yueru He; Yuechen Jiang; Zining Zhu 005; K. P. Subbalakshmi; Jimin Huang; Lingfei Qian; Xueqing Peng; et al. (ACL (1), 2025)

FLAG-TRADER: Fusion LLM-Agent with Gradient-based Reinforcement Learning for Financial Trading. - Guojun Xiong; Zhiyang Deng; Keyi Wang; Yupeng Cao; Haohang Li; Yangyang Yu; Xueqing Peng; Mingquan Lin; Kaleb E. Smith; Xiao-Yang Liu; Jimin Huang; Sophia Ananiadou; et al. (ACL (Findings), 2025)

Medical foundation large language models for comprehensive text analysis and beyond. - Qianqian Xie; Qingyu Chen 001; Aokun Chen; Cheng Peng 009; Yan Hu; Fongci Lin; Xueqing Peng; Jimin Huang; Jeffrey Zhang 010; Vipina Kuttichi Keloth; Xinyu Zhou; Lingfei Qian; et al. (npj Digit. Medicine, 2025)

Fino1: On the Transferability of Reasoning Enhanced LLMs to Finance. - Lingfei Qian; Weipeng Zhou; Yan Wang; Xueqing Peng; Jimin Huang; Qianqian Xie (CoRR, 2025)

Plutus: Benchmarking Large Language Models in Low-Resource Greek Finance. - Xueqing Peng; Triantafillos Papadopoulos; Efstathia Soufleri; Polydoros Giannouris; Ruoyu Xiang; Yan Wang; Lingfei Qian; Jimin Huang; Qianqian Xie; Sophia Ananiadou (CoRR, 2025)

OrdRankBen: A Novel Ranking Benchmark for Ordinal Relevance in NLP. - Yan Wang; Lingfei Qian; Xueqing Peng; Jimin Huang; Dongji Feng (CoRR, 2025)

FinTagging: An LLM-ready Benchmark for Extracting and Structuring Financial Information. - Yan Wang; Yang Ren; Lingfei Qian; Xueqing Peng; Keyi Wang; Yi Han; Dongji Feng; Xiao-Yang Liu; Jimin Huang; Qianqian Xie (CoRR, 2025)

MultiFinBen: A Multilingual, Multimodal, and Difficulty-Aware Benchmark for Financial LLM Evaluation. - Xueqing Peng; Lingfei Qian; Yan Wang; Ruoyu Xiang; Yueru He; Yang Ren; Mingyang Jiang; Jeff Zhao; Huan He; Yi Han; Yun Feng; Yuechen Jiang; et al. (CoRR, 2025)