Degree-Based Similarity Indexes for Identifying Potential miRNA-Disease Associations. - Yajie Meng; Min Jin; Xianfang Tang; Junlin Xu (IEEE Access, 2020)

LRMCMDA: Predicting miRNA-Disease Association by Integrating Low-Rank Matrix Completion With miRNA and Disease Similarity Information. - Junlin Xu; Wen Zhu; Lijun Cai; Bo Liao; Yajie Meng; Ju Xiang; Dawei Yuan; Geng Tian; Jialiang Yang (IEEE Access, 2020)

A Novel Hybrid Feature Selection and Ensemble Learning Framework for Unbalanced Cancer Data Diagnosis With Transcriptome and Functional Proteomic. - Xianfang Tang; Lijun Cai; Yajie Meng; Changlong Gu; Jialiang Yang; Jiasheng Yang (IEEE Access, 2021)

Drug repositioning based on similarity constrained probabilistic matrix factorization: COVID-19 as a case study. - Yajie Meng; Min Jin; Xianfang Tang; Junlin Xu (Appl. Soft Comput., 2021)

Drug repositioning based on the heterogeneous information fusion graph convolutional network. - Lijun Cai; Changcheng Lu; Junlin Xu; Yajie Meng; Peng Wang 035; Xiangzheng Fu; Xiangxiang Zeng; Yansen Su (Briefings Bioinform., 2021)

Adsorption Behaviors of Typical Proteins on BP, GR, and C2N Surfaces. - Ruirui Liu; Hong Lin Zhai; Yajie Meng; Min Zhu; Tao Wen; Nengzhi Jin (J. Chem. Inf. Model., 2021)

A weighted bilinear neural collaborative filtering approach for drug repositioning. - Yajie Meng; Changcheng Lu; Min Jin; Junlin Xu; Xiangxiang Zeng; Jialiang Yang (Briefings Bioinform., 2022)

Evaluating the performance of dropout imputation and clustering methods for single-cell RNA sequencing data. - Junlin Xu; Lingyu Cui; Jujuan Zhuang; Yajie Meng; Pingping Bing; Binsheng He; Geng Tian; Choi Kwok Pui; Taoyang Wu; Bing Wang; Jialiang Yang (Comput. Biol. Medicine, 2022)

Medical Image Segmentation Using Dual Branch Networks with Embedded Attention Mechanism. - Shuaishuai Yang; Min Jin; Lian Wang; Changcheng Lu; Yajie Meng; Die Yan; Zhijian Huang; Junlin Xu (BIBM, 2023)

Drug repositioning based on weighted local information augmented graph neural network. - Yajie Meng; Yi Wang; Junlin Xu; Changcheng Lu; Xianfang Tang; Tao Peng; Ben-gong Zhang; Geng Tian; Jialiang Yang (Briefings Bioinform., 2023)

Drug repositioning based on tripartite cross-network embedding and graph convolutional network. - Pan Zeng; Bofei Zhang; Aohang Liu; Yajie Meng; Xianfang Tang; Jialiang Yang; Junlin Xu (Expert Syst. Appl., 2024)

Joint extraction of biomedical overlapping triples through feature partition encoding. - Qiang Zhu; Cheng Hong 003; Yajie Meng; Huali Yang 001; Weizhong Zhao (Expert Syst. Appl., 2024)

PLM-IL4: Enhancing IL-4-inducing peptide prediction with protein language model. - Ruiqi Liu; Shankai Yan; Zilong Zhang; Junlin Xu; Yajie Meng; Qingchen Zhang 001; Leyi Wei; Quan Zou 001; Feifei Cui (Comput. Biol. Chem., 2025)

Automatic collaborative learning for drug repositioning. - Yi Wang; Yajie Meng; Chang Zhou; Xianfang Tang; Pan Zeng; Chu Pan; Qiang Zhu; Bengong Zhang; Junlin Xu (Eng. Appl. Artif. Intell., 2025)

Adaptive debiasing learning for drug repositioning. - Yajie Meng; Yi Wang; Xinrong Hu; Changcheng Lu; Xianfang Tang; Feifei Cui; Pan Zeng; Yuhua Yao; Jialiang Yang; Junlin Xu (J. Biomed. Informatics, 2025)

AVP-HNCL: Innovative Contrastive Learning with a Queue-Based Negative Sampling Strategy for Dual-Phase Antiviral Peptide Prediction. - Yuanhao Li; Aoyun Geng; Zheyu Zhou; Feifei Cui; Junlin Xu; Yajie Meng; Leyi Wei; Quan Zou 001; Qingchen Zhang 001; Zilong Zhang (J. Chem. Inf. Model., 2025)

m5U-HybridNet: Integrating an RNA Foundation Model with CNN Features for Accurate Prediction of 5-Methyluridine Modification Sites. - Xinyu Li; Zhenjie Luo; Jingwei Lv; Chao Yang; Shankai Yan; Junlin Xu; Yajie Meng; Leyi Wei; Zilong Zhang; Quan Zou 001; Feifei Cui (J. Chem. Inf. Model., 2025)

Enhancing Drug Repositioning Through Local Interactive Learning With Bilinear Attention Networks. - Xianfang Tang; Chang Zhou; Changcheng Lu; Yajie Meng; Junlin Xu; Xinrong Hu; Geng Tian; Jialiang Yang (IEEE J. Biomed. Health Informatics, 2025)

SWMA-UNet: Multi-Path Attention Network for Improved Medical Image Segmentation. - Xianfang Tang; Jincan Li; Qianrui Liu; Chang Zhou; Pan Zeng; Yajie Meng; Junlin Xu; Geng Tian; Jialiang Yang (IEEE J. Biomed. Health Informatics, 2025)

CDPMF-DDA: contrastive deep probabilistic matrix factorization for drug-disease association prediction. - Xianfang Tang; Yawen Hou; Yajie Meng; Zhaojing Wang; Changcheng Lu; Juan Lv; Xinrong Hu; Junlin Xu; Jialiang Yang (BMC Bioinform., 2025)