CircAST: Full-length Assembly and Quantification of Alternatively Spliced Isoforms in Circular RNAs. - Jing Wu; Yan Li 071; Cheng Wang; Yiqiang Cui; Tianyi Xu; Chang Wang; Xiao Wang 016; Jiahao Sha; Bin Jiang 001; Kai Wang; Zhibin Hu; Xuejiang Guo; et al. (Genom. Proteom. Bioinform., 2019)

IRESbase: A Comprehensive Database of Experimentally Validated Internal Ribosome Entry Sites. - Jian Zhao 034; Yan Li 071; Cong Wang 028; Haotian Zhang; Hao Zhang 080; Bin Jiang 001; Xuejiang Guo; Xiaofeng Song (Genom. Proteom. Bioinform., 2020)

DeepSCP: utilizing deep learning to boost single-cell proteome coverage. - Bing Wang; Yue Wang 123; Yu Chen; Mengmeng Gao; Jie Ren; Yueshuai Guo; Chenghao Situ; Yaling Qi; Hui Zhu; Yan Li 071; Xuejiang Guo (Briefings Bioinform., 2022)

TransGCN: a semi-supervised graph convolution network-based framework to infer protein translocations in spatio-temporal proteomics. - Bing Wang; Xiangzheng Zhang; Xudong Han; Bingjie Hao; Yan Li 071; Xuejiang Guo (Briefings Bioinform., 2024)