GraphTGI: an attention-based graph embedding model for predicting TF-target gene interactions. - Zhihua Du; Yang-Han Wu; Yu-An Huang; Jie Chen 027; Gui-Qing Pan; Lun Hu; Zhu-Hong You; Jian-Qiang Li 001 (Briefings Bioinform., 2022)

Heterogeneous graph embedding model for predicting interactions between TF and target gene. - Yu-An Huang; Gui-Qing Pan; Jia Wang 008; Jian-Qiang Li 001; Jie Chen 027; Yang-Han Wu (Bioinform., 2022)

Knowledge graph embedding for profiling the interaction between transcription factors and their target genes. - Yang-Han Wu; Yu-An Huang; Jian-Qiang Li 001; Zhu-Hong You; Peng-Wei Hu 001; Lun Hu; Victor C. M. Leung; Zhihua Du (PLoS Comput. Biol., 2023)