chipD: a web tool to design oligonucleotide probes for high-density tiling arrays. - Yann S. Dufour; Gary E. Wesenberg; Andrew J. Tritt; Jeremy D. Glasner; Nicole T. Perna; Julie C. Mitchell; Timothy J. Donohue (Nucleic Acids Res., 2010)

Limits of Feedback Control in Bacterial Chemotaxis. - Yann S. Dufour; Xiongfei Fu; Luis Hernandez-Nunez; Thierry Emonet (PLoS Comput. Biol., 2014)

Direct Correlation between Motile Behavior and Protein Abundance in Single Cells. - Yann S. Dufour; Sébastien Gillet; Nicholas W. Frankel; Douglas B. Weibel; Thierry Emonet (PLoS Comput. Biol., 2016)