GPPIAL: A New Global PPI Network Aligner Based on Orthologs. - Yaoran Chen; Yuanyuan Zhu 001; Ming Zhong 002; Rong Peng; Juan Liu 007 (BIBM, 2020)

COMNA: Core-attachment based protein complex detection via multiple network alignment. - Yaoran Chen; Yuanyuan Zhu 001; Ming Zhong 002; Juan Liu 007 (BIBM, 2021)

DCOAT: Dynamic Core-attachment based Protein Complex Detection. - Yaoran Chen; Difu Feng; Yuanyuan Zhu 001; Guojing Li; Ming Zhong 002; Tieyun Qian; Juan Liu 007 (BIBM, 2024)

Revisiting the Efficacy of Signal Decomposition in AI-based Time Series Prediction. - Kexin Jiang; Chuhan Wu; Yaoran Chen (CoRR, 2024)

Ada2MF: Dual-adaptive multi-fidelity neural network approach and its application in wind turbine wake prediction. - Lingyu Zhan; Zhenfan Wang; Yaoran Chen; Limin Kuang; Yu Tu; Dai Zhou; Zhaolong Han; Kai Zhang (Eng. Appl. Artif. Intell., 2024)

SRENet: Structure recovery ensemble network for single image deraining. - Dan Zhang; Yingbing Xu; Liyan Ma; Xiaowei Li; Xiangyu Zhang; Yan Peng; Yaoran Chen (Appl. Intell., 2024)

A Novel Optimization Framework for Offshore Wind Turbine Placement with Grid Pre-Planning and Coordinate Fine-Tuning. - Chunyang Pan; Shuli Wen; Miao Zhu; Zhaolong Han; Yaoran Chen; Pengfeng Lin (IAS, 2025)

Global-local adaptive resampling strategy for enhancing the performance of Physics-informed neural networks. - Lei Gao; Dan Zhang; Yaoran Chen; Xiaowei Li; Chunxin Li; Yan Peng (Eng. Appl. Artif. Intell., 2025)

Enhanced underwater acoustic target recognition using parallel dual-branch network with attention mechanism. - Jingpu Xu; Xiaowei Li; Dan Zhang; Yaoran Chen; Yan Peng; Wenhu Liu (Eng. Appl. Artif. Intell., 2025)

Constrained deep reinforcement transfer learning for short-term forecasting of wind discrepancies at ocean stations. - Jun Zhang; Yaoran Chen; Hang Pan 008; Liyuan Cao; Chunxiang Li (Neurocomputing, 2025)