Shortcomings of Current Grid Middlewares Regarding Privacy in HealthGrids. - Yassene Mohammed; Ulrich Sax; Fred Viezens; Otto Rienhoff (HealthGrid, 2007)

The Integration of Grid Resources into a Portal for Research Collaboratories. - Yassene Mohammed; Sabine Rey; Fabian Rakebrandt; Ulrich Sax (MedInfo, 2007)

Data protection and data security concept for medical applications in a grid computing environment. - Yassene Mohammed (2008)

Visualization in Health Grid Environments: A Novel Service and Business Approach. - Frank Dickmann; Mathias Kaspar; Benjamin Löhnhardt; Nick Kepper; Fred Viezens; Frank Hertel; Michael Lesnussa; Yassene Mohammed; Andreas Thiel; Thomas Steinke 001; Johannes Bernarding; Dagmar Krefting; et al. (GECON, 2009)

MediGRID: Towards a user friendly secured grid infrastructure. - Dagmar Krefting; Julian Bart; Kamen Beronov; Olga Dzhimova; Jürgen Falkner; Michael Hartung; Andreas Hoheisel; Tobias A. Knoch; Thomas Lingner; Yassene Mohammed; Kathrin Peter; Erhard Rahm; et al. (Future Gener. Comput. Syst., 2009)

On Transferring the Grid Technology to the Biomedical Community. - Yassene Mohammed; Ulrich Sax; Frank Dickmann; Jörg Lippert; Juri Solodenko; Gabriele von Voigt; Matthew Smith 001; Otto Rienhoff (HealthGrid, 2010)

Reaching for the Cloud: On the Lessons Learned from Grid Computing Technology Transfer Process to the Biomedical Community. - Yassene Mohammed; Frank Dickmann; Ulrich Sax; Gabriele von Voigt; Matthew Smith 001; Otto Rienhoff (MedInfo, 2010)

Data Decomposition in Biomedical e-Science Applications. - Yassene Mohammed; Shayan Shahand; Vladimir Korkhov; Angela C. M. Luyf; Barbera D. C. van Schaik; Matthan W. A. Caan; Antoine H. C. van Kampen; Magnus Palmblad; Sílvia D. Olabarriaga (e-Science Workshops, 2011)

Fast confidential search for bio-medical data using Bloom filters and Homomorphic Cryptography. - Henning Perl; Yassene Mohammed; Michael Brenner 003; Matthew Smith 001 (eScience, 2012)

Enhanced Resource Management Enabling Standard Parameter Sweep Jobs for Scientific Applications. - Sonja Holl; M. Shahbaz Memon; Bernd Schuller; Morris Riedel; Yassene Mohammed; Magnus Palmblad; Andrew S. Grimshaw (ICPP, 2013)

Automatic Peptides Selection for Targeted Proteomics. - Yassene Mohammed; Dominik Domanski; Angela M. Jackson; Derek Smith; André M. Deelder; Magnus Palmblad; Christoph H. Borchers (IWBBIO, 2014)

A new optimization phase for scientific workflow management systems. - Sonja Holl; Olav Zimmermann; Magnus Palmblad; Yassene Mohammed; Martin Hofmann-Apitius (Future Gener. Comput. Syst., 2014)

Privacy/performance trade-off in private search on bio-medical data. - Henning Perl; Yassene Mohammed; Michael Brenner 003; Matthew Smith 001 (Future Gener. Comput. Syst., 2014)

Scientific workflow optimization for improved peptide and protein identification. - Sonja Holl; Yassene Mohammed; Olav Zimmermann; Magnus Palmblad (BMC Bioinform., 2015)

Automating bibliometric analyses using Taverna scientific workflows: A tutorial on integrating Web Services. - Arzu Tugce Guler; Cathelijn J. F. Waaijer; Yassene Mohammed; Magnus Palmblad (J. Informetrics, 2016)

Workflows Orchestrating Workflows: Thousands of Queries and Their Fault Tolerance Using APIs of Omics Web Resources. - Yassene Mohammed (eScience, 2018)

Visualizing and comparing results of different peptide identification methods. - Yassene Mohammed; Magnus Palmblad (Briefings Bioinform., 2018)

MRMAssayDB: an integrated resource for validated targeted proteomics assays. - Pallab Bhowmick; Yassene Mohammed; Christoph H. Borchers (Bioinform., 2018)

Mouse Quantitative Proteomics Knowledgebase: reference protein concentration ranges in 20 mouse tissues using 5000 quantitative proteomics assays. - Yassene Mohammed; Pallab Bhowmick; Sarah A. Michaud; Albert Sickmann; Christoph H. Borchers (Bioinform., 2021)

Privacy-Preserving Multi-Center Differential Protein Abundance Analysis with FedProt. - Yuliya Burankova; Miriam Abele; Mohammad Bakhtiari; Christine von Törne; Teresa Barth; Lisa Schweizer; Pieter Giesbertz; Johannes R. Schmidt; Stefan Kalkhof; Janina Müller-Deile; Peter A. van Veelen; Yassene Mohammed; et al. (CoRR, 2024)