The complexity of some decision problems about two-dimensional array grammars. - Kenichi Morita; Yasunori Yamamoto; Kazuhiro Sugata (Inf. Sci., 1983)

Two-Dimensional Three-Way Array Grammars and their Acceptors. - Kenichi Morita; Yasunori Yamamoto; Kazuhiro Sugata (Int. J. Pattern Recognit. Artif. Intell., 1989)

Context-sensitivity of Two-Dimensional Regular Array Grammars. - Yasunori Yamamoto; Kenichi Morita; Kazuhiro Sugata (Int. J. Pattern Recognit. Artif. Intell., 1989)

Two-Dimensional Three-Way Array Grammars and their Acceptors. - Kenichi Morita; Yasunori Yamamoto; Kazuhiro Sugata (Array Grammars, Patterns and Recognizers, 1989)

Context-sensitivity of Two-Dimensional Regular Array Grammars. - Yasunori Yamamoto; Kenichi Morita; Kazuhiro Sugata (Array Grammars, Patterns and Recognizers, 1989)

Two-Dimensional Uniquely Parsable Isometric Array Grammars. - Yasunori Yamamoto; Kenichi Morita (Int. J. Pattern Recognit. Artif. Intell., 1992)

Automatic Construction of Knowledge Base from Biological Papers. - Yoshihiro Ohta; Yasunori Yamamoto; Tomoko Okazaki; Ikuo Uchiyama; Toshihisa Takagi (ISMB, 1997)

A Hierarchy of Uniquely Parsable Grammar Classes and Deterministic Acceptors. - Kenichi Morita; Noritaka Nishihara; Yasunori Yamamoto; Zhiguo Zhang (Acta Informatica, 1997)

Market-based Network Formation for an Ad Hoc P2P Wireless Network. - Yasunori Yamamoto; Junseok Hwang (PWC, 2002)

A Method to Retrieve Papers from MEDLINE: PETER System. - Hiroko Ao; Yasunori Yamamoto; Toshihisa Takagi (TREC, 2003)

Sign Language Synthesis for the Mobile Environments. - Seiji Igi; Mitsue Tamaru; Yasunori Yamamoto; Megumu Ujitani; Shigeharu Sugita (WSCG, 2003)

A Practical Partial Parser for Biomedical Literature Summarization. - Yasunori Yamamoto; Toshihisa Takagi (NLUCS, 2004)

A Sentence Classification System for Multi Biomedical Literature Summarization. - Yasunori Yamamoto; Toshihisa Takagi (ICDE Workshops, 2005)

OReFiL: an online resource finder for life sciences. - Yasunori Yamamoto; Toshihisa Takagi (BMC Bioinform., 2007)

Biomedical knowledge navigation by literature clustering. - Yasunori Yamamoto; Toshihisa Takagi (J. Biomed. Informatics, 2007)

Figure Classification in Biomedical Literature towards Figure Mining. - Natsu Ishii; Asako Koike; Yasunori Yamamoto; Toshihisa Takagi (BIBM, 2008)

Natural Language Query Processing for Life Science Knowledge - Position Paper. - Jin-Dong Kim; Yasunori Yamamoto; Atsuko Yamaguchi; Mitsuteru Nakao; Kenta Oouchida; Hong-Woo Chun; Toshihisa Takagi (AMT, 2010)

Figure classification in biomedical literature to elucidate disease mechanisms, based on pathways. - Natsu Ishii; Asako Koike; Yasunori Yamamoto; Toshihisa Takagi (Artif. Intell. Medicine, 2010)

The DBCLS BioHackathon: standardization and interoperability for bioinformatics web services and workflows. - Toshiaki Katayama; Kazuharu Arakawa; Mitsuteru Nakao; Keiichiro Ono; Kiyoko F. Aoki-Kinoshita; Yasunori Yamamoto; Atsuko Yamaguchi; Shuichi Kawashima; Hong-Woo Chun; Jan Aerts; Bruno Aranda; Lord H. Barboza; et al. (J. Biomed. Semant., 2010)

Discriminative Application of String Similarity Methods to Chemical and Non-chemical Names for Biomedical Abbreviation Clustering. - Atsuko Yamaguchi; Yasunori Yamamoto; Jin-Dong Kim; Toshihisa Takagi; Akinori Yonezawa (BIBM, 2011)

Discriminative Optimization of String Similarity and Its Application to Biomedical Abbreviation Clustering. - Atsuko Yamaguchi; Yasunori Yamamoto; Jin-Dong Kim; Toshihisa Takagi; Akinori Yonezawa (ICMLA (2), 2011)

Building linked open data using approximate string matching methods and domain specific resources. - Yasunori Yamamoto; Atsuko Yamaguchi; Akinori Yonezawa (SWAT4LS, 2011)

Allie: a database and a search service of abbreviations and long forms. - Yasunori Yamamoto; Atsuko Yamaguchi; Hidemasa Bono; Toshihisa Takagi (Database J. Biol. Databases Curation, 2011)

The 2nd DBCLS BioHackathon: interoperable bioinformatics Web services for integrated applications. - Toshiaki Katayama; Mark D. Wilkinson; Rutger A. Vos; Takeshi Kawashima; Shuichi Kawashima; Mitsuteru Nakao; Yasunori Yamamoto; Hong-Woo Chun; Atsuko Yamaguchi; Shin Kawano; Jan Aerts; Kiyoko F. Aoki-Kinoshita; et al. (J. Biomed. Semant., 2011)

YummyData: Measuring the "Sparkliness" of Biomedical Sparql Endpoints. - Andrea Splendiani; Johan Nyström-Persson; Michel Dumontier; Yasunori Yamamoto (SWAT4LS, 2012)

Building Linked Open Data of Life Science Dictionary. - Yasunori Yamamoto; Shoko Kawamoto (SWAT4LS, 2012)

The Genia Event Extraction Shared Task, 2013 Edition - Overview. - Jin-Dong Kim; Yue Wang 040; Yasunori Yamamoto (BioNLP@ACL (Shared Task), 2013)

Common Metadata to Search for Non-digital Cultural Resources in Heterogeneous Databases. - Yasunori Yamamoto; Fumio Adachi; Kozaburo Hachimura (Culture and Computing, 2013)

Building Linked Open Data towards integration of biomedical scientific literature with DBpedia. - Yasunori Yamamoto; Atsuko Yamaguchi; Akinori Yonezawa (J. Biomed. Semant., 2013)

A SPARQL Endpoint Profiler for an Efficient Question Answering System. - Yasunori Yamamoto (SWAT4LS, 2014)

BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains. - Toshiaki Katayama; Mark D. Wilkinson; Kiyoko F. Aoki-Kinoshita; Shuichi Kawashima; Yasunori Yamamoto; Atsuko Yamaguchi; Shinobu Okamoto; Shin Kawano; Jin-Dong Kim; Yue Wang 040; Hongyan Wu; Yoshinobu Kano; et al. (J. Biomed. Semant., 2014)

BioBenchmark Toyama 2012: an evaluation of the performance of triple stores on biological data. - Hongyan Wu; Toyofumi Fujiwara; Yasunori Yamamoto; Jerven T. Bolleman; Atsuko Yamaguchi (J. Biomed. Semant., 2014)

Efficiently Finding Paths Between Classes to Build a SPARQL Query for Life-Science Databases. - Atsuko Yamaguchi; Kouji Kozaki; Kai Lenz; Hongyan Wu; Yasunori Yamamoto; Norio Kobayashi (JIST, 2015)

RDF-Based Integration with SPARQL Building System for Life Science Database Archive. - Atsuko Yamaguchi; Katsuhiko Okubo; Norio Kobayashi; Kouji Kozaki; Sadahiro Kumagai; Kai Lenz; Tomoe Nobusada; Hongyan Wu; Yasunori Yamamoto; Hideki Hatanaka (SWAT4LS, 2015)

D2RQ Mapper. - Yasunori Yamamoto; Toshiaki Katayama (SWAT4LS, 2015)

Colil: a database and search service for citation contexts in the life sciences domain. - Toyofumi Fujiwara; Yasunori Yamamoto (J. Biomed. Semant., 2015)

Semantic Data Acquisition by Traversing Class-Class Relationships Over Linked Open Data. - Atsuko Yamaguchi; Kouji Kozaki; Kai Lenz; Yasunori Yamamoto; Hiroshi Masuya; Norio Kobayashi (JIST, 2016)

SPARQL Builder: Constructing SPARQL Query by Traversing Class-Class Relationships for Life Science Databases. - Atsuko Yamaguchi; Kouji Kozaki; Kai Lenz; Yasunori Yamamoto; Hiroshi Masuya; Norio Kobayashi (JIST (Workshops & Posters), 2016)

Umaka-Yummy Data: Where Providers and Consumers in Life Sciences Communicate with Each Other. - Yasunori Yamamoto; Atsuko Yamaguchi; Andrea Splendiani (JIST (Workshops & Posters), 2016)

Data Acquisition by Traversing Class-Class Relationships over the Linked Open Data. - Atsuko Yamaguchi; Kouji Kozaki; Kai Lenz; Yasunori Yamamoto; Hiroshi Masuya; Norio Kobayashi (ISWC (Posters & Demos), 2016)

Dynamic potential-model-based feature for lane change prediction. - Hanwool Woo; Yonghoon Ji; Hitoshi Kono; Yusuke Tamura; Yasuhide Kuroda; Takashi Sugano; Yasunori Yamamoto; Atsushi Yamashita; Hajime Asama (SMC, 2016)

SPARQL Query Construction with Monitoring Service for Endpoints. - Atsuko Yamaguchi; Yasunori Yamamoto; Kouji Kozaki; Kai Lenz; Hiroshi Masuya; Norio Kobayashi (SWAT4LS, 2016)

Umaka-Yummy Data: A Place to Facilitate Communication between Data Providers and Consumers. - Yasunori Yamamoto; Atsuko Yamaguchi; Andrea Splendiani (SWAT4LS, 2016)

Driver classification in vehicle following behavior by using dynamic potential field method. - Hanwool Woo; Yonghoon Ji; Yusuke Tamura; Yasuhide Kuroda; Takashi Sugano; Yasunori Yamamoto; Atsushi Yamashita; Hajime Asama (ITSC, 2017)

Semantic Graph Analysis for Federated LOD Surfing in Life Sciences. - Atsuko Yamaguchi; Kouji Kozaki; Yasunori Yamamoto; Hiroshi Masuya; Norio Kobayashi (JIST, 2017)

LOD Surfer API: Web API for LOD Surfing Using Class-Class Relationships in Life Sciences. - Atsuko Yamaguchi; Kouji Kozaki; Yasunori Yamamoto; Hiroshi Masuya; Norio Kobayashi (SWAT4LS, 2017)

Lane-Change Detection Based on Vehicle-Trajectory Prediction. - Hanwool Woo; Yonghoon Ji; Hitoshi Kono; Yusuke Tamura; Yasuhide Kuroda; Takashi Sugano; Yasunori Yamamoto; Atsushi Yamashita; Hajime Asama (IEEE Robotics Autom. Lett., 2017)

Advanced Adaptive Cruise Control Based on Collision Risk Assessment. - Hanwool Woo; Yonghoon Ji; Yusuke Tamura; Yasuhide Kuroda; Takashi Sugano; Yasunori Yamamoto; Atsushi Yamashita; Hajime Asama (ITSC, 2018)

A Quantitative Evaluation of Natural Language Question Interpretation for Question Answering Systems. - Takuto Asakura; Jin-Dong Kim; Yasunori Yamamoto; Yuka Tateisi; Toshihisa Takagi (JIST, 2018)

Inference of Functions, Roles, and Applications of Chemicals Using Linked Open Data and Ontologies. - Tatsuya Kushida; Kouji Kozaki; Takahiro Kawamura; Yuka Tateisi; Yasunori Yamamoto; Toshihisa Takagi (JIST, 2018)

YummyData: providing high-quality open life science data. - Yasunori Yamamoto; Atsuko Yamaguchi; Andrea Splendiani (Database J. Biol. Databases Curation, 2018)

Reconstruction of Hierarchical Structures in a Thesaurus-based Ontology through Curation by Domain Experts. - Tatsuya Kushida; Kouji Kozaki; Yasunori Yamamoto; Atsuko Yamaguchi; Takahiro Kawamura; Takako Nakagawa; Yuka Tateisi; Toshihisa Takagi (ICBO, 2019)

Building Knowledge Graph Across Different Subdomains Using Interlinking Ontology for Biomedical Concepts. - Kouji Kozaki; Tatsuya Kushida; Yasunori Yamamoto; Toshihisa Takagi (JIST (2), 2019)

Investigating Schema Definitions Using RDFS and OWL 2 for RDF Databases in Life Sciences. - Atsuko Yamaguchi; Tatsuya Kushida; Yasunori Yamamoto; Kouji Kozaki (JIST (2), 2019)

Integrated Growth Media Database by Standardizing Ingredient Information. - Shuichi Kawashima; Toshiaki Katayama; Yuki Moriya; Shinobu Okamoto; Yasunori Yamamoto; Susumu Goto (SWAT4HCLS, 2019)

UmakaData Extension: Toward Realization of a Practical SPARQL Endpoint Discovery Service for Life Sciences. - Norio Kobayashi; Yasunori Yamamoto; Atsuko Yamaguchi (SWAT4HCLS, 2019)

Finding RDF Data you need by Umaka Suite. - Yasunori Yamamoto; Atsuko Yamaguchi (SWAT4HCLS, 2019)

Lane-change detection based on individual driving style. - Hanwool Woo; Yonghoon Ji; Yusuke Tamura; Yasuhide Kuroda; Takashi Sugano; Yasunori Yamamoto; Atsushi Yamashita; Hajime Asama (Adv. Robotics, 2019)

BioHackathon series in 2013 and 2014: improvements of semantic interoperability in life science data and services. - Toshiaki Katayama; Shuichi Kawashima; Gos Micklem; Shin Kawano; Jin-Dong Kim; Simon Kocbek; Shinobu Okamoto; Yue Wang 040; Hongyan Wu; Atsuko Yamaguchi; Yasunori Yamamoto; Erick Antezana; et al. (F1000Research, 2019)

Interconnection of Biological Knowledge Using NikkajiRDF and Interlinking Ontology for Biological Concepts. - Tatsuya Kushida; Kouji Kozaki; Takahiro Kawamura; Yuka Tateisi; Yasunori Yamamoto; Toshihisa Takagi (New Gener. Comput., 2019)

Tracing patient PLOD by mobile phones Mitigation of epidemic risks based on patient locational open data. - Ikki Ohmukai; Yasunori Yamamoto; Maori Ito; Takashi Okumura (WETICE, 2020)

Tracing patients' PLOD with mobile phones: Mitigation of epidemic risks through patients' locational open data. - Ikki Ohmukai; Yasunori Yamamoto; Maori Ito; Takashi Okumura (CoRR, 2020)

BioHackathon 2015: Semantics of data for life sciences and reproducible research. - Rutger A. Vos; Toshiaki Katayama; Hiroyuki Mishima; Shin Kawano; Shuichi Kawashima; Jin-Dong Kim; Yuki Moriya; Toshiaki Tokimatsu; Atsuko Yamaguchi; Yasunori Yamamoto; Hongyan Wu; Peter Amstutz; et al. (F1000Research, 2020)

Computation of Infection Risk via Confidential Locational Entries: A Precedent Approach for Contact Tracing With Privacy Protection. - Junko Ami; Kunihiro Ishii; Yoshihide Sekimoto; Hiroshi Masui; Ikki Ohmukai; Yasunori Yamamoto; Takashi Okumura (IEEE Access, 2021)

TogoID: an exploratory ID converter to bridge biological datasets. - Shuya Ikeda; Hiromasa Ono; Tazro Ohta; Hirokazu Chiba; Yuki Naito; Yuki Moriya; Shuichi Kawashima; Yasunori Yamamoto; Shinobu Okamoto; Susumu Goto; Toshiaki Katayama (Bioinform., 2022)

A Comparative Study on Storing and Retrieval of URIs for Life Sciences Databases. - Atsuko Yamaguchi; Yasunori Yamamoto (IJCKG (Workshop/Poster/Demo), 2023)

Towards Semantic Data Management of Visual Computing Datasets: Increasing Usability of MetaVD. - Yasunori Yamamoto; Shusaku Egami; Yuya Yoshikawa; Ken Fukuda (ISWC (Posters/Demos/Industry), 2023)

To build densely connected Web of RDF data. - Yasunori Yamamoto; Takatomo Fujisawa (SWAT4HCLS, 2023)

CIRO: COVID-19 infection risk ontology. - Shusaku Egami; Yasunori Yamamoto; Ikki Ohmukai; Takashi Okumura (CoRR, 2023)

Extracting shapes from large RDF data collections. - Daniel Fernández-Álvarez; Yasunori Yamamoto; José Emilio Labra Gayo; Andra Waagmeester (SWAT4HCLS, 2024)

Make RDF data more inter-connectable. - Yasunori Yamamoto; Takatomo Fujisawa (SWAT4HCLS, 2024)

Functional implications of glycans and their curation: insights from the workshop held at the 16th Annual International Biocuration Conference in Padua, Italy. - Karina Martinez; Jon Agirre; Yukie Akune; Kiyoko F. Aoki-Kinoshita; Cecilia N. Arighi; Kristian B. Axelsen; Evan Bolton; Emily Bordeleau; Nathan J. Edwards; Elisa Fadda; Ten Feizi; Catherine A. Hayes; et al. (Database J. Biol. Databases Curation, 2024)

Expanding the concept of ID conversion in TogoID by introducing multi-semantic and label features. - Shuya Ikeda; Kiyoko F. Aoki-Kinoshita; Hirokazu Chiba; Susumu Goto; Masae Hosoda; Shuichi Kawashima; Jin-Dong Kim; Yuki Moriya; Tazro Ohta; Hiromasa Ono; Terue Takatsuki; Yasunori Yamamoto; et al. (J. Biomed. Semant., 2025)