Triangle Graphs and Their Coloring. - Yaw-Ling Lin (ORDAL, 1994)

Complexity aspects of visibility graphs. - Yaw-Ling Lin; Steven Skiena (Int. J. Comput. Geom. Appl., 1995)

Algorithms for Square Roots of Graphs. - Yaw-Ling Lin; Steven Skiena (SIAM J. Discret. Math., 1995)

Fast Algorithms for Independent Domination and Efficient Domination in Trapezoid Graphs. - Yaw-Ling Lin (ISAAC, 1998)

Parallel Algorithms for Shortest Paths and Related Problems on Trapezoid Graphs. - Fang-Rong Hsu; Yaw-Ling Lin; Yin-Te Tsai (ISAAC, 1999)

Minimum Back-Walk-Free Latency Problem. - Yaw-Ling Lin (COCOON, 2002)

The on-line first-fit algorithm for radio frequency assignment problems. - Yin-Te Tsai; Yaw-Ling Lin; Fang-Rong Hsu (Inf. Process. Lett., 2002)

Efficient algorithms for locating the length-constrained heaviest segments with applications to biomolecular sequence analysis. - Yaw-Ling Lin; Tao Jiang 001; Kun-Mao Chao (J. Comput. Syst. Sci., 2002)

Triangle Graphs and Simple Trapezoid Graphs. - Yaw-Ling Lin (J. Inf. Sci. Eng., 2002)

Efficient Algorithms for Descendent Subtrees Comparison of Phylogenetic Trees with Applications to Co-evolutionary Classifications in Bacterial Genome. - Yaw-Ling Lin; Tsan-sheng Hsu (ISAAC, 2003)

MAVG: locating non-overlapping maximum average segments in a given sequence. - Yaw-Ling Lin; Xiaoqiu Huang 001; Tao Jiang 001; Kun-Mao Chao (Bioinform., 2003)

Genome-Wide Alternative Splicing Events Detection through Analysis of Large Scale ESTs. - Fang-Rong Hsu; Hwan-You Chang; Yaw-Ling Lin; Yin-Te Tsai; Hui-Ling Peng; Ying Tsong Chen; Che Feng Chen; Chia Yang Cheng; Chia-Hung Liu; Min Yao Shih (BIBE, 2004)

Performance Issues of Grid Computing Based on Different Architecture Cluster Computing Platforms. - Hsun-Chang Chang; Kuan-Ching Li; Yaw-Ling Lin; Chao-Tung Yang; Hsiao-Hsi Wang; Liang-Teh Lee (AINA, 2005)

The application of alternative splicing graphs in quantitative analysis of alternative splicing form from EST database. - Hsun-Chang Chang; Po-Shun Yu; Tze-Wei Huang; Fang-Rong Hsu; Yaw-Ling Lin (Int. J. Comput. Appl. Technol., 2005)

Efficient algorithms for the minimum connected domination on trapezoid graphs. - Yin-Te Tsai; Yaw-Ling Lin; Fang-Rong Hsu (Inf. Sci., 2007)

Efficient Algorithms for SNP Haplotype Block Selection Problems. - Yaw-Ling Lin (COCOON, 2008)

CORAL-M: Heuristic coding region alignment method for multiple genome sequences. - Che-Lun Hung; Chun-Yuan Lin; Shih-Cheng Chang; Yeh-Ching Chung; Shu Ju Hsieh; Chuan Yi Tang; Yaw-Ling Lin (BIBM Workshops, 2010)

Building Cost-Efficient Computer-Aided Learning Environments via Virtualization and Service-Based Software. - Shueh-Cheng Hu; I-Ching Chen; Yaw-Ling Lin (CSEE (4), 2011)

CloudTSS: A TagSNP Selection Approach on Cloud Computing. - Che-Lun Hung; Yaw-Ling Lin; Guan-Jie Hua; Yu-Chen Hu (FGIT-GDC, 2011)

CUDA-FRESCO: Frequency-Based RE-Sequencing Tool Based on CO-clustering Segmentation by GPU. - Chun-Yuan Lin; Chuan Yi Tang; Sheng-Ta Li; Yaw-Ling Lin; Che-Lun Hung (HPCC, 2011)

Hybrid Temporal Pattern Mining with Time Grain on Stock Index. - Sheng Xiang Fan; Jieh-Shan Yeh; Yaw-Ling Lin (ICGEC, 2011)

Efficient GPGPU-Based Parallel Packet Classification. - Che-Lun Hung; Yaw-Ling Lin; Kuan-Ching Li; Hsiao-Hsi Wang; Shih-Wei Guo (TrustCom, 2011)

Constructing Orthogonal de Bruijn Sequences. - Yaw-Ling Lin; Charles B. Ward; Bharat Jain; Steven Skiena (WADS, 2011)

Multiple genome sequences alignment algorithm based on coding regions. - Che-Lun Hung; Chun-Yuan Lin; Shih-Cheng Chang; Yeh-Ching Chung; Shu Ju Hsieh; Chuan Yi Tang; Yaw-Ling Lin (Int. J. Comput. Biol. Drug Des., 2011)

Efficient protein structure alignment algorithms under the MapReduce framework. - Che-Lun Hung; Yaw-Ling Lin; Chen-En Hsieh; Guan-Jie Hua (CloudCom, 2012)

Preference Utility algorithm using GPGPU architecture. - Che-Lun Hung; Hsiao-Hsi Wang; Jieh-Shan Yeh; Yu-Chen Hu; Chun-Yuan Lin; Yaw-Ling Lin (ICIS, 2013)

Synthetic Sequence Design for Signal Location Search. - Yaw-Ling Lin; Charles B. Ward; Steven Skiena (Algorithmica, 2013)

Metagenomic Analysis of Human Oral Microbiome Composition on the Cloud Platform. - Wen-Pei Chen; Suh-Jen Jane Tsai; Ming-Li Liou; Chi-Ying Tsai; Ki-Hok Liao; Chun-Jung Chen; Yaw-Ling Lin (ICS, 2014)

Biomolecular Docking Sites Selection by Surface Filtration and Refinement. - Chen-En Hsieh; Grace Shiahuy Chen; Chun-Jung Chen; Yaw-Ling Lin (ICS, 2014)

Cloud computing service framework for bioinformatics tools. - Guan-Jie Hua; Chuan Yi Tang; Che-Lun Hung; Yaw-Ling Lin (BIBM, 2015)