Finding Approximate Tandem Repeats in Genomic Sequences. - Ydo Wexler; Zohar Yakhini; Yechezkel Kashi; Dan Geiger (J. Comput. Biol., 2005)

A Variational Inference Procedure Allowing Internal Structure for Overlapping Clusters and Deterministic Constraints. - Dan Geiger; Christopher Meek; Ydo Wexler (J. Artif. Intell. Res., 2006)

Variational Upper Bounds for Probabilistic Phylogenetic Models. - Ydo Wexler; Dan Geiger (RECOMB, 2007)

Importance Sampling via Variational Optimization. - Ydo Wexler; Dan Geiger (UAI, 2007)

Similarities and differences of gene expression in yeast stress conditions. - Oleg Rokhlenko; Ydo Wexler; Zohar Yakhini (Bioinform., 2007)

A Study of Accessible Motifs and RNA Folding Complexity. - Ydo Wexler; Chaya Ben-Zaken Zilberstein; Michal Ziv-Ukelson (J. Comput. Biol., 2007)

Variational approximations for probabilistic graphical models. - Ydo Wexler (2007)

MAS: a multiplicative approximation scheme for probabilistic inference. - Ydo Wexler; Christopher Meek (NIPS, 2008)

Inference for Multiplicative Models. - Ydo Wexler; Christopher Meek (UAI, 2008)

A Faster Algorithm for RNA Co-folding. - Michal Ziv-Ukelson; Irit Gat-Viks; Ydo Wexler; Ron Shamir (WABI, 2008)

Variational Upper and Lower Bounds for Probabilistic Graphical Models. - Ydo Wexler; Dan Geiger (J. Comput. Biol., 2008)

Embedded self-adaptation to escape from local optima. - Oleg Rokhlenko; Ydo Wexler (GEC Summit, 2009)

Relating Reputation and Money in On-line Markets. - Ashwin Swaminathan; Renan G. Cattelan; Cherian V. Mathew; Ydo Wexler; Darko Kirovski (Web Intelligence, 2009)

Speeding up HMM algorithms for genetic linkage analysis via chain reductions of the state space. - Dan Geiger; Christopher Meek; Ydo Wexler (Bioinform., 2009)

RNAslider: a faster engine for consecutive windows folding and its application to the analysis of genomic folding asymmetry. - Yair Horesh; Ydo Wexler; Ilana Lebenthal; Michal Ziv-Ukelson; Ron Unger (BMC Bioinform., 2009)

Estimating genome-wide IBD sharing from SNP data via an efficient hidden Markov model of LD with application to gene mapping. - Sivan Bercovici; Christopher Meek; Ydo Wexler; Dan Geiger (Bioinform., 2010)

A Faster Algorithm for Simultaneous Alignment and Folding of RNA. - Michal Ziv-Ukelson; Irit Gat-Viks; Ydo Wexler; Ron Shamir (J. Comput. Biol., 2010)

Relating Reputation and Money in Online Markets. - Ashwin Swaminathan; Renan G. Cattelan; Ydo Wexler; Cherian V. Mathew; Darko Kirovski (ACM Trans. Web, 2010)