Exploring nociceptive response by BOLD fMRI in α-chloralose anesthetized rats. - Yen-Yu I. Shih; You-Yin Chen; Jin-May Chen; Yun Lung; Jun-Ying Chen; Chen Chang; Jyh-Cheng Chen; Fu-Shan Jaw (EMBC, 2006)

Automatic segmentation of magnetic resonance images using a decision tree with spatial information. - Wen-Hung Chao; You-Yin Chen; Sheng-Huang Lin; Yen-Yu I. Shih; Siny Tsang (Comput. Medical Imaging Graph., 2009)

Imaging brain hemodynamic changes during rat forepaw electrical stimulation using functional photoacoustic microscopy. - Lun-De Liao; Meng-Lin Li; Hsin-Yi Lai; Yen-Yu I. Shih; Yu-Chun Lo; Siny Tsang; Paul Chang-Po Chao 001; Chin-Teng Lin; Fu-Shan Jaw; You-Yin Chen (NeuroImage, 2010)

Correction of inhomogeneous magnetic resonance images using multiscale retinex for segmentation accuracy improvement. - Wen-Hung Chao; Hsin-Yi Lai; Yen-Yu I. Shih; You-Yin Chen; Yu-Chun Lo; Sheng-Huang Lin; Siny Tsang; Robby Wu; Fu-Shan Jaw (Biomed. Signal Process. Control., 2012)

Methylene blue potentiates stimulus-evoked fMRI responses and cerebral oxygen consumption during normoxia and hypoxia. - Shiliang Huang; Fang Du; Yen-Yu I. Shih; Qiang Shen; F. Gonzalez-Lima; Timothy Q. Duong (NeuroImage, 2013)

Ultra high-resolution fMRI and electrophysiology of the rat primary somatosensory cortex. - Yen-Yu I. Shih; You-Yin Chen; Hsin-Yi Lai; Yu-Chieh Jill Kao; Bai-Chuang Shyu; Timothy Q. Duong (NeuroImage, 2013)

Neural Circuit Modulation During Deep Brain Stimulation at the Subthalamic Nucleus for Parkinson's Disease: What Have We Learned from Neuroimaging Studies? - Daniel L. Albaugh; Yen-Yu Ian Shih (Brain Connect., 2014)

Functional MRI reveals frequency-dependent responses during deep brain stimulation at the subthalamic nucleus or internal globus pallidus. - Hsin-Yi Lai; John R. Younce; Daniel L. Albaugh; Yu-Chieh Jill Kao; Yen-Yu Ian Shih (NeuroImage, 2014)

Combining optogenetic stimulation and fMRI to validate a multivariate dynamical systems model for estimating causal brain interactions. - Srikanth Ryali; Yen-Yu Ian Shih; Tianwen Chen; John Kochalka; Daniel L. Albaugh; Zhongnan Fang; Kaustubh Supekar; Jin Hyung Lee; Vinod Menon (NeuroImage, 2016)

Resting state network topology of the ferret brain. - Zhe Charles Zhou; Andrew P. Salzwedel; Susanne Radtke-Schuller; Yuhui Li; Kristin K. Sellers; John H. Gilmore; Yen-Yu Ian Shih; Flavio Fröhlich; Wei Gao (NeuroImage, 2016)

Functional circuit mapping of striatal output nuclei using simultaneous deep brain stimulation and fMRI. - Nathalie Van Den Berge; Daniel L. Albaugh; Andrew P. Salzwedel; Christian Vanhove; Roel Van Holen; Wei Gao; Garret D. Stuber; Yen-Yu Ian Shih (NeuroImage, 2017)

Animal Functional Magnetic Resonance Imaging: Trends and Path Toward Standardization. - Francesca Mandino; Domenic H. Cerri; Clément M. Garin; Milou Straathof; Geralda A. F. van Tilborg; M. Mallar Chakravarty; Marc Dhenain; Rick M. Dijkhuizen; Alessandro Gozzi; Andreas Hess 001; Shella D. Keilholz; Jason P. Lerch; et al. (Frontiers Neuroinformatics, 2019)

One-pot synthesis of carboxymethyl-dextran coated iron oxide nanoparticles (CION) for preclinical fMRI and MRA applications. - Manasmita Das; Esteban A. Oyarzabal; Lars Chen; Sung-Ho Lee; Neal Shah; Gabby Gerlach; Weiting Zhang; Tzu-Hao Harry Chao; Nathalie Van Den Berge; Carolyn Liu; Carrie Donley; Stephanie A. Montgomery; et al. (NeuroImage, 2021)

An isotropic EPI database and analytical pipelines for rat brain resting-state fMRI. - Sung-Ho Lee; Margaret A. Broadwater; Woomi Ban; Tzu-Wen Winnie Wang; Hyeon-Joong Kim; Jaiden Seongmi Dumas; Ryan P. Vetreno; Melissa A. Herman; A. Leslie Morrow; Joyce Besheer; Thomas L. Kash; Charlotte A. Boettiger; et al. (NeuroImage, 2021)

Simultaneous fMRI and fast-scan cyclic voltammetry bridges evoked oxygen and neurotransmitter dynamics across spatiotemporal scales. - Lindsay R. Walton; Matthew Verber; Sung-Ho Lee; Tzu-Hao Harry Chao; R. Mark Wightman; Yen-Yu Ian Shih (NeuroImage, 2021)