Indel seeds for homology search. - Denise Y. F. Mak; Yevgeniy Gelfand; Gary Benson (ISMB (Supplement of Bioinformatics), 2006)

TRDB - The Tandem Repeats Database. - Yevgeniy Gelfand; Alfredo Rodriguez; Gary Benson (Nucleic Acids Res., 2007)

Evolutionary History of Mammalian Transposons Determined by Genome-Wide Defragmentation. - Joti Giordano; Yongchao Ge; Yevgeniy Gelfand; György Abrusán; Gary Benson; Peter E. Warburton (PLoS Comput. Biol., 2007)