Identifying Protein Complexes from PPI Networks Using GO Semantic Similarity. - Jian Wang 021; Dong Xie; Hongfei Lin; Zhihao Yang; Yijia Zhang 001 (BIBM, 2011)

Neighborhood hash graph kernel for protein-protein interaction extraction. - Yijia Zhang 001; Hongfei Lin; Zhihao Yang; Yanpeng Li (J. Biomed. Informatics, 2011)

Hash Subgraph Pairwise Kernel for Protein-Protein Interaction Extraction. - Yijia Zhang 001; Hongfei Lin; Zhihao Yang; Jian Wang 021; Yanpeng Li (IEEE ACM Trans. Comput. Biol. Bioinform., 2012)

Integrating multiple biomedical resources for protein complex prediction. - Yijia Zhang 001; Hongfei Lin; Zhihao Yang; Jian Wang 021; Bo Xu 009 (BIBM, 2013)

Protein Complex Prediction in Large Ontology Attributed Protein-Protein Interaction Networks. - Yijia Zhang 001; Hongfei Lin; Zhihao Yang; Jian Wang 021; Yanpeng Li; Bo Xu 009 (IEEE ACM Trans. Comput. Biol. Bioinform., 2013)

Biomedical event trigger detection by dependency-based word embedding. - Jian Wang 021; Jianhai Zhang; Yuan An; Hongfei Lin; Zhihao Yang; Yijia Zhang 001; Yuanyuan Sun 002 (BIBM, 2015)

A Security Protocol Applied to Covert Communication Platform and Its Formal Analysis. - Yi-Jia Zhang 001; Rui-Ying Liu; Zhong-Jian Kang; Han Qi (COMPSAC Workshops, 2015)

Application of Dichotomy to Network Partition Based on Sub Network Exchange Gain. - Yi-Jia Zhang 001; Zhong-Jian Kang; Zhen Wu; Zhe-Ming Lu 001 (IIH-MSP, 2015)

A Method of the Detection of Frequency-Hopping Signal Based on Channelized Receiver in the Complicated Electromagnetic Environment. - Yi-Jia Zhang 001; Rui-Ying Liu; Hua-jun Song (IIH-MSP, 2015)

Integrating experimental and literature protein-protein interaction data for protein complex prediction. - Yijia Zhang 001; Hongfei Lin; Zhihao Yang; Jian Wang 021 (BMC Genom., 2015)

Construction of dynamic probabilistic protein interaction networks for protein complex identification. - Yijia Zhang 001; Hongfei Lin; Zhihao Yang; Jian Wang 021 (BMC Bioinform., 2016)

A method for predicting protein complex in dynamic PPI networks. - Yijia Zhang 001; Hongfei Lin; Zhihao Yang; Jian Wang 021; Yiwei Liu; Shengtian Sang (BMC Bioinform., 2016)

The Structural Vulnerability Analysis of Power Grids Based on Overall Information Centrality. - Yi-Jia Zhang 001; Zhong-Jian Kang; Xin-Ling Guo; Zhe-Ming Lu 001 (IEICE Trans. Inf. Syst., 2016)

The Controllability of Power Grids in Comparison with Classical Complex Network Models. - Yi-Jia Zhang 001; Zhong-Jian Kang; Xin-Feng Li; Zhe-Ming Lu 001 (IEICE Trans. Inf. Syst., 2016)

A graph kernel based on context vectors for extracting drug-drug interactions. - Wei Zheng 003; Hongfei Lin; Zhehuan Zhao; Bo Xu 009; Yijia Zhang 001; Zhihao Yang; Jian Wang 021 (J. Biomed. Informatics, 2016)

Integrating embeddings of multiple gene networks to prioritize complex disease-associated genes. - Mengmeng Wu; Wanwen Zeng; Wenqiang Liu; Yijia Zhang 001; Ting Chen 006; Rui Jiang 001 (BIBM, 2017)

An attention-based effective neural model for drug-drug interactions extraction. - Wei Zheng 003; Hongfei Lin; Ling Luo 001; Zhehuan Zhao; Zhengguang Li; Yijia Zhang 001; Zhihao Yang; Jian Wang 021 (BMC Bioinform., 2017)

The Structural Vulnerability Analysis of Power Grids Based on Second-Order Centrality. - Zhong-Jian Kang; Yi-Jia Zhang 001; Xin-Ling Guo; Zhe-Ming Lu 001 (IEICE Trans. Fundam. Electron. Commun. Comput. Sci., 2017)

Improve Diversity-oriented Biomedical Information Retrieval using Supervised Query Expansion. - Bo Xu 009; Hongfei Lin; Liang Yang 003; Kan Xu; Yijia Zhang 001; Dongyu Zhang 001; Zhihao Yang; Jian Wang 021; Yuan Lin 001; Fuliang Yin (BIBM, 2018)

A multi-task learning based approach to biomedical entity relation extraction. - Qingqing Li; Zhihao Yang; Ling Luo 001; Lei Wang 085; Yin Zhang 009; Hongfei Lin; Jian Wang 021; Liang Yang 003; Kan Xu; Yijia Zhang 001 (BIBM, 2018)

HMNPPID: A Database of Protein-protein Interactions Associated with Human Malignant Neoplasms. - Qingqing Li; Zhihao Yang; Zhehuan Zhao; Ling Luo 001; Zhiheng Li 004; Lei Wang 085; Yin Zhang 009; Hongfei Lin; Jian Wang 021; Yijia Zhang 001 (BIBM, 2018)

PC-SENE: A node embedding based method for protein complex detection. - Xiaoxia Liu; Zhihao Yang; Shengtian Sang; Lei Wang 085; Yin Zhang 009; Hongfei Lin; Bo Xu 009; Yijia Zhang 001; Liang Yang 003; Kan Xu; Jian Wang 021 (BIBM, 2018)

Protein-Protein Interaction Article Classification: A Knowledge-enriched Self-Attention Convolutional Neural Network Approach. - Ling Luo 001; Zhihao Yang; Lei Wang 085; Yin Zhang 009; Hongfei Lin; Jian Wang 021; Liang Yang 003; Kan Xu; Yijia Zhang 001 (BIBM, 2018)

A Knowledge Graph based Bidirectional Recurrent Neural Network Method for Literature-based Discovery. - Shengtian Sang; Zhihao Yang; Xiaoxia Liu; Lei Wang 085; Yin Zhang 009; Hongfei Lin; Jian Wang 021; Liang Yang 003; Kan Xu; Yijia Zhang 001 (BIBM, 2018)

Hierarchical Recurrent Convolutional Neural Network for Chemical-protein Relation Extraction from Biomedical Literature. - Cong Sun 004; Zhihao Yang; Lei Wang 085; Yin Zhang 009; Hongfei Lin; Jian Wang 021; Liang Yang 003; Kan Xu; Yijia Zhang 001 (BIBM, 2018)

A Weak Supervised Learning Method for Essential Protein Detection Based on STRING Database and Learning Representation. - Zhizheng Wang; Yuanyuan Sun 002; Yawen Guan; Yibin Zhang; Liang Yang 003; Kan Xu; Yijia Zhang 001; Hongfei Lin (BIBM, 2018)

Protein Complexes Detection Based on Global Network Representation Learning. - Bo Xu 009; Kun Li; Xiaoxia Liu; Delong Liu; Yijia Zhang 001; Hongfei Lin; Zhihao Yang; Jian Wang 021; Feng Xia 001 (BIBM, 2018)

Drug-drug interaction extraction via hierarchical RNNs on sequence and shortest dependency paths. - Yijia Zhang 001; Wei Zheng 003; Hongfei Lin; Jian Wang 021; Zhihao Yang; Michel Dumontier (Bioinform., 2018)

Protein complexes identification based on go attributed network embedding. - Bo Xu 008; Kun Li; Wei Zheng 003; Xiaoxia Liu; Yijia Zhang 001; Zhehuan Zhao; Zengyou He (BMC Bioinform., 2018)

Letter to the Editor (Response from author): MeSH qualifiers, publication types and relation occurrence frequency are also useful for a better sentence-level extraction of biomedical relations. - Yijia Zhang 001 (J. Biomed. Informatics, 2018)

A hybrid model based on neural networks for biomedical relation extraction. - Yijia Zhang 001; Hongfei Lin; Zhihao Yang; Jian Wang 021; Shaowu Zhang 002; Yuanyuan Sun 002; Liang Yang 003 (J. Biomed. Informatics, 2018)

An effective neural model extracting document level chemical-induced disease relations from biomedical literature. - Wei Zheng 003; Hongfei Lin; Zhiheng Li 004; Xiaoxia Liu; Zhengguang Li; Bo Xu 009; Yijia Zhang 001; Zhihao Yang; Jian Wang 021 (J. Biomed. Informatics, 2018)

Chemical-protein interaction extraction via contextualized word representations and multihead attention. - Yijia Zhang 001; Hongfei Lin; Zhihao Yang; Jian Wang 021; Yuanyuan Sun 002 (Database J. Biol. Databases Curation, 2019)

A supervised term ranking model for diversity enhanced biomedical information retrieval. - Bo Xu 009; Hongfei Lin; Liang Yang 003; Kan Xu; Yi-Jia Zhang 001; Dongyu Zhang 001; Zhihao Yang; Jian Wang 021; Yuan Lin 001; Fuliang Yin (BMC Bioinform., 2019)

Adverse drug reaction detection via a multihop self-attention mechanism. - Tongxuan Zhang; Hongfei Lin; Yuqi Ren; Liang Yang 003; Bo Xu 009; Zhihao Yang; Jian Wang 021; Yijia Zhang 001 (BMC Bioinform., 2019)

Exploring Semi-supervised Variational Autoencoders for Biomedical Relation Extraction. - Yijia Zhang 001; Zhiyong Lu (CoRR, 2019)

Chemical-protein interaction extraction from biomedical literature: a hierarchical recurrent convolutional neural network method. - Cong Sun 004; Zhihao Yang; Lei Wang 085; Yin Zhang 009; Hongfei Lin; Jian Wang 021; Liang Yang 003; Kan Xu; Yijia Zhang 001 (Int. J. Data Min. Bioinform., 2019)

Neural network-based approaches for biomedical relation classification: A review. - Yijia Zhang 001; Hongfei Lin; Zhihao Yang; Jian Wang 021; Yuanyuan Sun 002; Bo Xu 009; Zhehuan Zhao (J. Biomed. Informatics, 2019)

Extracting drug-drug interactions with hybrid bidirectional gated recurrent unit and graph convolutional network. - Di Zhao 003; Jian Wang 021; Hongfei Lin; Zhihao Yang; Yijia Zhang 001 (J. Biomed. Informatics, 2019)

Extracting Protein-Protein Interactions Affected by Mutations via Auxiliary Task and Domain Pre-trained Model. - Yu Wang; Shaowu Zhang 002; Yijia Zhang 001; Jian Wang 021; Hongfei Lin (BIBM, 2020)

A hierarchical knowledge-aware neural network for protein-protein interaction article classification. - Hao Wei 002; Ai Zhou; Yijia Zhang 001; Fei Chen; Wen Qu; Mingyu Lu (BIBM, 2020)

Hyperbolic Attributed Network Embedding with self-adaptive Random Walks. - Bin Wu; Yijia Zhang 001; Yuxin Wang (CIIS, 2020)

Biomedical document triage using a hierarchical attention-based capsule network. - Jian Wang 021; Mengying Li; Qishuai Diao; Hongfei Lin; Zhihao Yang; Yi-Jia Zhang 001 (BMC Bioinform., 2020)

Incorporating representation learning and multihead attention to improve biomedical cross-sentence n-ary relation extraction. - Di Zhao 003; Jian Wang 021; Yi-Jia Zhang 001; Xin Wang; Hongfei Lin; Zhihao Yang (BMC Bioinform., 2020)

A Multichannel Biomedical Named Entity Recognition Model Based on Multitask Learning and Contextualized Word Representations. - Hao Wei 002; Mingyuan Gao; Ai Zhou; Fei Chen; Wen Qu; Yijia Zhang 001; Mingyu Lu (Wirel. Commun. Mob. Comput., 2020)

Co-Attentive Span Network with Multi-task learning for Biomedical Named Entity Recognition. - Peng Chen; Jian Wang 021; Hongfei Lin; Yijia Zhang 001; Zhihao Yang; Di Zhao 003; Hui Ma (BIBM, 2021)

Auto-learning Convolution-Based Graph Convolutional Network for Medical Relation Extraction. - Mengyuan Qian; Jian Wang 021; Hongfei Lin; Di Zhao 003; Yijia Zhang 001; Wentai Tang; Zhihao Yang (CCIR, 2021)

A Drug Repositioning Method Based on Heterogeneous Graph Neural Network. - Yu Wang; Shaowu Zhang 002; Yijia Zhang 001; Liang Yang 003; Hongfei Lin (CCIR, 2021)

Aspect Fusion Graph Convolutional Networks for Aspect-Based Sentiment Analysis. - Fuyao Zhang; Yijia Zhang 001; Shuo Hou; Fei Chen; Mingyu Lu (CCIR, 2021)

LDA-Transformer Model in Chinese Poetry Authorship Attribution. - Ai Zhou; Yijia Zhang 001; Hao Wei 002; Mingyu Lu (CCIR, 2021)

Biomedical cross-sentence relation extraction via multihead attention and graph convolutional networks. - Di Zhao 003; Jian Wang 021; Hongfei Lin; Xin Wang; Zhihao Yang; Yijia Zhang 001 (Appl. Soft Comput., 2021)

JLAN: medical code prediction via joint learning attention networks and denoising mechanism. - Xingwang Li 003; Yijia Zhang 001; Faiz ul Islam; Deshi Dong; Hao Wei 002; Mingyu Lu (BMC Bioinform., 2021)

Correlation of Centralities: A Study through Distinct Graph Robustness. - Xin-Ling Guo; Zhe-Ming Lu 001; Yi-Jia Zhang 001 (IEICE Trans. Inf. Syst., 2021)

Improving biomedical word representation with locally linear embedding. - Di Zhao 003; Jian Wang 021; Yonghe Chu; Yijia Zhang 001; Zhihao Yang; Hongfei Lin (Neurocomputing, 2021)

Sentence representation with manifold learning for biomedical texts. - Di Zhao 003; Jian Wang 021; Hongfei Lin; Yonghe Chu; Yan Wang; Yi-Jia Zhang 001; Zhihao Yang (Knowl. Based Syst., 2021)

Medical code prediction via capsule networks and ICD knowledge. - Weidong Bao 002; Hongfei Lin; Yi-Jia Zhang 001; Jian Wang 021; Shaowu Zhang 002 (BMC Medical Informatics Decis. Mak., 2021)

Hierarchical matching network for multi-turn response selection in retrieval-based chatbots. - Hui Ma; Jian Wang 021; Hongfei Lin; Yi-Jia Zhang 001 (Soft Comput., 2021)

Syntactic Type-aware Graph Attention Network for Drug-drug Interactions and their Adverse Effects Extraction. - Peng Chen; Jian Wang 021; Hongfei Lin; Yichen Wang; Di Zhao 003; Yijia Zhang 001 (BIBM, 2022)

Knowledge-Enhanced Dual Graph Neural Network for Robust Medicine Recommendation. - Xingwang Li 003; Yijia Zhang 001; Jian Wang 021; Mingyu Lu; Hongfei Lin (BIBM, 2022)

Contrastive Self-Supervised Representation Learning for Protein Complexes Identification. - Peixuan Zhou; Yijia Zhang 001; Fei Chen; Mingyu Lu; Wen Qu; Hongfei Lin; Xiaoxia Liu (BIBM, 2022)

KGSG: Knowledge Guided Syntactic Graph Model for Drug-Drug Interaction Extraction. - Wei Du; Yijia Zhang 001; Ming Yang; Da Liu; Xiaoxia Liu (CCKS, 2022)

Document-Level Relation Extraction with a Dependency Syntax Transformer and Supervised Contrastive Learning. - Ming Yang; Yijia Zhang 001; Santosh Kumar Banbhrani; Hongfei Lin; Mingyu Lu (CCKS, 2022)

NIDN: Medical Code Assignment via Note-Code Interaction Denoising Network. - Xiaobo Li 007; Yijia Zhang 001; Xingwang Li 003; Jian Wang 021; Mingyu Lu (ISBRA, 2022)

Gaussian-Enhanced Representation Model for Extracting Protein-Protein Interactions Affected by Mutations. - Da Liu; Yi-Jia Zhang 001; Ming Yang; Fei Chen; Mingyu Lu (ISBRA, 2022)

Heterogeneous PPI Network Representation Learning for Protein Complex Identification. - Peixuan Zhou; Yi-Jia Zhang 001; Fei Chen; Kuo Pang; Mingyu Lu (ISBRA, 2022)

Heterogeneous Adaptive Denoising Networks for Recommendation. - Sichen Jin; Yijia Zhang 001; Mingyu Lu (NCAA (1), 2022)

MGEDR: A Molecular Graph Encoder for Drug Recommendation. - Kaiyuan Shi; Shaowu Zhang 002; Haifeng Liu 002; Yijia Zhang 001; Hongfei Lin (NLPCC (2), 2022)

Small protein complex prediction algorithm based on protein-protein interaction network segmentation. - Jiaqing Lyu; Zhen Yao; Bing Liang; Yiwei Liu; Yijia Zhang 001 (BMC Bioinform., 2022)

A supervised protein complex prediction method with network representation learning and gene ontology knowledge. - Xiaoxu Wang; Yijia Zhang 001; Peixuan Zhou; Xiaoxia Liu (BMC Bioinform., 2022)

Dependency multi-weight-view graphs for event detection with label co-occurrence. - Yan Wang; Jian Wang 021; Hongfei Lin; Yijia Zhang 001; Zhihao Yang (Inf. Sci., 2022)

Heterogeneous graph neural networks with denoising for graph embeddings. - Xinrui Dong; Yijia Zhang 001; Kuo Pang; Fei Chen; Mingyu Lu (Knowl. Based Syst., 2022)

A multi-view network for real-time emotion recognition in conversations. - Hui Ma; Jian Wang 021; Hongfei Lin; Xuejun Pan; Yijia Zhang 001; Zhihao Yang (Knowl. Based Syst., 2022)

Biomedical event trigger extraction based on multi-layer residual BiLSTM and contextualized word representations. - Hao Wei 002; Ai Zhou; Yijia Zhang 001; Fei Chen; Wen Qu; Mingyu Lu (Int. J. Mach. Learn. Cybern., 2022)

Helmet Wearing State Detection Based on Improved Yolov5s. - Yi-Jia Zhang 001; Fu-Su Xiao; Zhe-Ming Lu 001 (Sensors, 2022)

Multi-Visit Interactive Recalibration Network for Drug Recommendation with a Triple Graph Encoder. - Xiaobo Li 007; Yi-Jia Zhang 001; Xiaodi Hou; Fanjun Meng; Hongfei Lin (BIBM, 2023)

MKFN: Multimodal Knowledge Fusion Network for Automatic ICD Coding. - Shilong Wang 004; Hongfei Lin; Yijia Zhang 001; Xiaobo Li 007; Wen Qu (BIBM, 2023)

P-MNER: Cross Modal Correction Fusion Network with Prompt Learning for Multimodal Named Entity Recognition. - Zhuang Wang; Yijia Zhang 001; Kang An; Xiaoying Zhou; Mingyu Lu; Hongfei Lin (CCL, 2023)

Adversarial Network with External Knowledge for Zero-Shot Stance Detection. - Chunling Wang; Yi-Jia Zhang 001; Xingyu Yu; Guantong Liu; Fei Chen; Hongfei Lin (CCL, 2023)

Self Question-Answering: Aspect Sentiment Triplet Extraction via a Multi-MRC Framework Based on Rethink Mechanism. - Fuyao Zhang; Yi-Jia Zhang 001; Mengyi Wang; Hong Yang; Mingyu Lu; Liang Yang 003 (CCL, 2023)

International Public Opinion Analysis in COVID-19 Pandemic from Mainstream and Social Media. - Xingyu Yu; Yu Zhang; Chunling Wang; Yijia Zhang 001 (DSIT, 2023)

Multi-Perspective Semantic Enhanced Model for Heterogeneous Graph Embedding with Contrastive Learning. - Zeqian Li; Yijia Zhang 001; Huimin Yu; Chunling Wang (FAIML, 2023)

DTI-MACF: Drug-Target Interaction Prediction via Multi-component Attention Network. - Jiejin Deng; Yijia Zhang 001; Jing Zhang; Yaohua Pan; Mingyu Lu (ICIC (3), 2023)

Radiology Report Generation via Visual Recalibration and Context Gating-Aware. - Xiaodi Hou; Guoming Sang; Zhi Liu; Xiaobo Li 007; Yijia Zhang 001 (ISBRA, 2023)

DKFM: Dual Knowledge-Guided Fusion Model for Drug Recommendation. - Yankai Tian; Yijia Zhang 001; Xingwang Li 003; Mingyu Lu (PAKDD (3), 2023)

Self-Attention and MLP Auxiliary Convolution for Face Anti-Spoofing. - Hanqing Gu; Jiayin Chen; Fu-Su Xiao; Yi-Jia Zhang 001; Zhe-Ming Lu 001 (IEEE Access, 2023)

Knowledge Adaptive Multi-Way Matching Network for Biomedical Named Entity Recognition via Machine Reading Comprehension. - Peng Chen; Jian Wang 021; Hongfei Lin; Yijia Zhang 001; Zhihao Yang (IEEE ACM Trans. Comput. Biol. Bioinform., 2023)

Knowledge Guided Attention and Graph Convolutional Networks for Chemical-Disease Relation Extraction. - Yi Sun; Jian Wang 021; Hongfei Lin; Yijia Zhang 001; Zhihao Yang (IEEE ACM Trans. Comput. Biol. Bioinform., 2023)

DGCL: Distance-wise and Graph Contrastive Learning for medication recommendation. - Xingwang Li 003; Yi-Jia Zhang 001; Xiaobo Li 007; Hao Wei 002; Mingyu Lu (J. Biomed. Informatics, 2023)

ADPG: Biomedical entity recognition based on Automatic Dependency Parsing Graph. - Yumeng Yang; Hongfei Lin; Zhihao Yang; Yijia Zhang 001; Di Zhao 003; Shuaiheng Huai (J. Biomed. Informatics, 2023)

Automatic International Classification of Diseases Coding via Note-Code Interaction Network with Denoising Mechanism. - Xiaobo Li 007; Yi-Jia Zhang 001; Xingwang Li 003; Xianwei Pan; Jian Wang 021; Mingyu Lu (J. Comput. Biol., 2023)

Extracting Mutant-Affected Protein-Protein Interactions via Gaussian-Enhanced Representation and Contrastive Learning. - Da Liu; Yi-Jia Zhang 001; Ming Yang; Jianyuan Yuan; Wen Qu (J. Comput. Biol., 2023)

Protein Complex Identification Based on Heterogeneous Protein Information Network. - Peixuan Zhou; Yi-Jia Zhang 001; Zeqian Li; Kuo Pang; Di Zhao 003 (J. Comput. Biol., 2023)

FeMIP: detector-free feature matching for multimodal images with policy gradient. - Yide Di; Yun Liao; Hao Zhou; Kaijun Zhu; Yijia Zhang 001; Qing Duan; Junhui Liu; Mingyu Lu (Appl. Intell., 2023)

MKCL: Medical Knowledge with Contrastive Learning model for radiology report generation. - Xiaodi Hou; Zhi Liu; Xiaobo Li 007; Xingwang Li 003; Shengtian Sang; Yijia Zhang 001 (J. Biomed. Informatics, 2023)

CSDTI: an interpretable cross-attention network with GNN-based drug molecule aggregation for drug-target interaction prediction. - Yaohua Pan; Yijia Zhang 001; Jing Zhang; Mingyu Lu (Appl. Intell., 2023)

A Domain Knowledge Transformer Model for Occupation Profiling. - Ai Zhou; Yi-Jia Zhang 001; Mingyu Lu (Int. J. Comput. Intell. Syst., 2023)

A Differential Privacy Federated Learning Approach for Diabetic Retinopathy Detection. - Yicheng Li; Yijia Zhang 001; Guantong Liu; Mingyu Lu (ADMA (4), 2024)

Diff4VS: HIV-inhibiting Molecules Generation with Classifier Guidance Diffusion for Virtual Screening. - Jiaqing Lyu; Changjie Chen 003; Bing Liang; Yijia Zhang 001 (BIBM, 2024)

Rethinking Logical Reasoning Design for Document-level Biomedical Relation Extraction. - Fengyu Zhang; Jianyuan Yuan; Yimeng Qiu; Hongfei Lin; Yijia Zhang 001 (BIBM, 2024)

Just Single Reasoning! A Hierarchical Network for Document-level Biomedical Relation Extraction with Multi-Granularity Learning. - Fengyu Zhang; Jianyuan Yuan; Yimeng Qiu; Hongfei Lin; Yijia Zhang 001 (BIBM, 2024)

Dual-Granularity Hierarchical Fusion Network for Multimodal Humor Recognition on Memes. - Mengyi Wang; Shuo Hou; Hongfei Lin; Yi-Jia Zhang 001 (CCIR, 2024)

Relation Extraction Model Based on Overlap Rules and Abductive Learning. - Zihui Wei; Yi-Jia Zhang 001; Mingyu Lu; Hongfei Lin (CCIR, 2024)

Biomedical Relation Extraction via Domain Knowledge and Prompt Learning. - Jianyuan Yuan; Wei Du; Xiaoxia Liu; Yijia Zhang 001 (EEKE/AII@iConference, 2024)

IFNet: An Image-Enhanced Cross-Modal Fusion Network for Radiology Report Generation. - Yi Guo; Xiaodi Hou; Zhi Liu; Yijia Zhang 001 (ISBRA (1), 2024)

Hybrid Attention Knowledge Fusion Network for Automated Medical Code Assignment. - Shilong Wang 004; Xiaobo Li 007; Wen Qu; Hongfei Lin; Yi-Jia Zhang 001 (ISBRA (1), 2024)

Efficient Low-Dimensional Representation Via Manifold Learning-Based Model for Multimodal Sentiment Analysis. - Xingang Wang; Mengyi Wang; Hai Cui; Yijia Zhang 001 (MMAsia, 2024)

Humor Recognition Based on Dual Graph Attention Network with Incongruity and Ambiguity Feature Extraction. - Zhichao Ping; Zhi Liu; Mengyi Wang; Hongfei Lin; Yijia Zhang 001 (NLPCC (4), 2024)

Heterogeneous graph contrastive learning with gradient balance for drug repositioning. - Hai Cui; Meiyu Duan; Haijia Bi; Xiaobo Li 007; Xiaodi Hou; Yi-Jia Zhang 001 (Briefings Bioinform., 2024)

Spatiotemporal constrained RNA-protein heterogeneous network for protein complex identification. - Zeqian Li; Shilong Wang 004; Hai Cui; Xiaoxia Liu; Yijia Zhang 001 (Briefings Bioinform., 2024)

Multi-source biological knowledge-guided hypergraph spatiotemporal subnetwork embedding for protein complex identification. - Shilong Wang 004; Hai Cui; Yanchen Qu; Yijia Zhang 001 (Briefings Bioinform., 2024)

Knowledge enhanced attention aggregation network for medicine recommendation. - Jiedong Wei; Yi-Jia Zhang 001; Xingwang Li 003; Mingyu Lu; Hongfei Lin (Comput. Biol. Chem., 2024)

Comparative learning based stance agreement detection framework for multi-target stance detection. - Guantong Liu; Yi-Jia Zhang 001; Chunling Wang; Mingyu Lu; Huan-Ling Tang (Eng. Appl. Artif. Intell., 2024)

A dual-channel multimodal sentiment analysis framework based on three-way decision. - Xingang Wang; Mengyi Wang; Hai Cui; Yi-Jia Zhang 001 (Eng. Appl. Artif. Intell., 2024)

A doctor's diagnosis experience enhanced transformer model for automatic diagnosis. - Fuxi Zhang; Guoming Sang; Zhi Liu; Hongfei Lin; Yi-Jia Zhang 001 (Eng. Appl. Artif. Intell., 2024)

A meta-contrastive learning with data augmentation framework for zero-shot stance detection. - Chunling Wang; Yi-Jia Zhang 001; Shilong Wang 004 (Expert Syst. Appl., 2024)

Visual Recalibration and Gating Enhancement Network for Radiology Report Generation. - Xiaodi Hou; Guoming Sang; Zhi Liu; Xiaobo Li 007; Yi-Jia Zhang 001 (J. Comput. Biol., 2024)

SADR: Self-Supervised Graph Learning With Adaptive Denoising for Drug Repositioning. - Sichen Jin; Yijia Zhang 001; Huimin Yu; Mingyu Lu (IEEE ACM Trans. Comput. Biol. Bioinform., 2024)

Temporal Protein Complex Identification Based on Dynamic Heterogeneous Protein Information Network Representation Learning. - Zeqian Li; Yi-Jia Zhang 001; Peixuan Zhou (IEEE ACM Trans. Comput. Biol. Bioinform., 2024)

A Transformer-Based Model With Self-Distillation for Multimodal Emotion Recognition in Conversations. - Hui Ma; Jian Wang 021; Hongfei Lin; Bo Zhang 121; Yi-Jia Zhang 001; Bo Xu 009 (IEEE Trans. Multim., 2024)

MPTN: A message-passing transformer network for drug repurposing from knowledge graph. - Yuanxin Liu; Guoming Sang; Zhi Liu; Yilin Pan; Junkai Cheng; Yijia Zhang 001 (Comput. Biol. Medicine, 2024)

Aspect category sentiment analysis based on prompt-based learning with attention mechanism. - Zhichao Ping; Guoming Sang; Zhi Liu; Yijia Zhang 001 (Neurocomputing, 2024)

Heterogeneous Graph Convolutional Network for E-Commerce Product Recommendation With Adaptive Denoising Training. - Sichen Jin; Yijia Zhang 001; Xingwang Li 003; Mingyu Lu (IEEE Trans. Consumer Electron., 2024)

Local feature matching from detector-based to detector-free: a survey. - Yun Liao; Yide Di; Kaijun Zhu; Hao Zhou; Mingyu Lu; Yijia Zhang 001; Qing Duan; Junhui Liu (Appl. Intell., 2024)

IMAEN: An interpretable molecular augmentation model for drug-target interaction prediction. - Jing Zhang; Zhi Liu; Yaohua Pan; Hongfei Lin; Yi-Jia Zhang 001 (Expert Syst. Appl., 2024)

MIVI: multi-stage feature matching for infrared and visible image. - Yide Di; Yun Liao; Kaijun Zhu; Hao Zhou; Yijia Zhang 001; Qing Duan; Junhui Liu; Mingyu Lu (Vis. Comput., 2024)

MAFN: multi-level attention fusion network for multimodal named entity recognition. - Xiaoying Zhou; Yijia Zhang 001; Zhuang Wang; Mingyu Lu; Xiaoxia Liu (Multim. Tools Appl., 2024)

Multidta: drug-target binding affinity prediction via representation learning and graph convolutional neural networks. - Jiejin Deng; Yi-Jia Zhang 001; Yaohua Pan; Xiaobo Li 007; Mingyu Lu (Int. J. Mach. Learn. Cybern., 2024)

TransFOL: A Logical Query Model for Complex Relational Reasoning in Drug-Drug Interaction. - Junkai Cheng; Yi-Jia Zhang 001; Hengyi Zhang; Shaoxiong Ji; Mingyu Lu (IEEE J. Biomed. Health Informatics, 2024)

A Unified Review of Deep Learning for Automated Medical Coding. - Shaoxiong Ji; Xiaobo Li 007; Wei Sun 046; Hang Dong 002; Ara Taalas; Yijia Zhang 001; Honghan Wu; Esa Pitkänen; Pekka Marttinen (ACM Comput. Surv., 2024)

Fuzzy-DDI: A robust fuzzy logic query model for complex drug-drug interaction prediction. - Junkai Cheng; Yi-Jia Zhang 001; Hengyi Zhang; Mingyu Lu (Artif. Intell. Medicine, 2025)

Deep learning for automatic ICD coding: Review, opportunities and challenges. - Xiaobo Li 007; Yijia Zhang 001; Xiaodi Hou; Shilong Wang 004; Hongfei Lin (Artif. Intell. Medicine, 2025)

LCDL: Classification of ICD codes based on disease label co-occurrence dependency and LongFormer with medical knowledge. - Yumeng Yang; Hongfei Lin; Zhihao Yang; Yijia Zhang 001; Di Zhao 003; Ling Luo 001 (Artif. Intell. Medicine, 2025)

Multitask gated interactive network for automatic international classification of diseases coding with dual denoising mechanism. - Xiaobo Li 007; Yi-Jia Zhang 001; Xiaodi Hou; Shilong Wang 004; Wen Qu (Eng. Appl. Artif. Intell., 2025)

Recalibrated cross-modal alignment network for radiology report generation with weakly supervised contrastive learning. - Xiaodi Hou; Xiaobo Li 007; Zhi Liu; Shengtian Sang; Mingyu Lu; Yi-Jia Zhang 001 (Expert Syst. Appl., 2025)

Towards robust drug recommendation based on dual perspective encoder and iterative denoising mechanism. - Xiaobo Li 007; Fanjun Meng; Jiedong Wei; Yi-Jia Zhang 001 (Expert Syst. Appl., 2025)

Manifold knowledge-guided feature fusion network for multimodal sentiment analysis. - Xingang Wang; Mengyi Wang; Hai Cui; Yi-Jia Zhang 001 (Expert Syst. Appl., 2025)

Negative sampling strategy based on multi-hop neighbors for graph representation learning. - Kaiyu Zhang; Guoming Sang; Junkai Cheng; Zhi Liu; Yi-Jia Zhang 001 (Expert Syst. Appl., 2025)

Knowledge enhanced representation learning network for drug recommendation. - Xiaobo Li 007; Xiaodi Hou; Fanjun Meng; Xiaokun Zhang 001; Mingyu Lu; Hongfei Lin; Yi-Jia Zhang 001 (Inf. Process. Manag., 2025)

DACG: Dual Attention and Context Guidance model for radiology report generation. - Wangyu Lang; Zhi Liu; Yijia Zhang 001 (Medical Image Anal., 2025)

Semantic-Enhanced Graph Contrastive Learning With Adaptive Denoising for Drug Repositioning. - Huimin Yu; Mingyu Lu; Zeqian Li; Yi-Jia Zhang 001 (IEEE J. Biomed. Health Informatics, 2025)

Multi-source medical knowledge adaptive fusion network for combinatorial medication recommendation. - Yiming Zhou; Jiedong Wei; Xiaodi Hou; Meiyu Duan; Yi-Jia Zhang 001 (Appl. Intell., 2025)

IMGEF: integrated multimodal graph-enhanced framework for radiology report generation. - Muhammad Usman; Xiaodi Hou; Yi Guo; Zonglin Liang; Yijia Zhang 001 (Multim. Syst., 2025)

CEFM: CLIP Encoded Fusion Model for multimodal humor recognition on memes. - Shuo Hou; Yi-Jia Zhang 001; Mengyi Wang; Hongfei Lin; Mingyu Lu (Multim. Tools Appl., 2025)

Time-Frequency Causal Hidden Markov Model for speech-based Alzheimer's disease longitudinal detection. - Yilin Pan; Jiabing Li; Yating Zhang; Zhuoran Tian; Yijia Zhang 001; Mingyu Lu (Comput. Speech Lang., 2026)

Modality fusion using auxiliary tasks for dementia detection. - Hangshou Shao; Yilin Pan; Yue Wang; Yi-Jia Zhang 001 (Comput. Speech Lang., 2026)