Efficient Encoding of Graphics Primitives with Simplex-based Structures. - Yibo Wen; Yunfan Yang (CoRR, 2023)

AlignAb: Pareto-Optimal Energy Alignment for Designing Nature-Like Antibodies. - Yibo Wen; Chenwei Xu; Jerry Yao-Chieh Hu; Han Liu 001 (CoRR, 2024)

Identification of inflammation-related biomarkers and therapeutic targets for neurogenic bladder fibrosis via multi-omics analysis. - Qi Li; Lei Lv; Yanping Zhang; Junkui Wang; Xingchen Liu; Zhan Wang; Junjie Zhang; Shengli Zhang; Yibo Wen; Luping Li; Yingzhong Fan; Jianguo Wen (Comput. Biol. Medicine, 2025)

A Survey of Large Language Models for Text-Guided Molecular Discovery: from Molecule Generation to Optimization. - Ziqing Wang; Kexin Zhang 007; Zihan Zhao; Yibo Wen; Abhishek Pandey; Han Liu; Kaize Ding (CoRR, 2025)