RiceVarMap: a comprehensive database of rice genomic variations. - Hu Zhao; Wen Yao; Yidan Ouyang; Wanneng Yang; Gongwei Wang; Xingming Lian; Yongzhong Xing; Lingling Chen; Weibo Xie (Nucleic Acids Res., 2015)

shinyCircos: an R/Shiny application for interactive creation of Circos plot. - Yiming Yu; Yidan Ouyang; Wen Yao (Bioinform., 2018)

Helitron distribution in Brassicaceae and whole Genome Helitron density as a character for distinguishing plant species. - Kaining Hu; Kai Xu; Jing Wen; Bin Yi; Jinxiong Shen; Chaozhi Ma; Tingdong Fu; Yidan Ouyang; Jinxing Tu (BMC Bioinform., 2019)