Effective Feature Representation for Clinical Text Concept Extraction. - Yifeng Tao; Bruno Godefroy; Guillaume Genthial; Christopher Potts (CoRR, 2018)

Phylogenies Derived from Matched Transcriptome Reveal the Evolution of Cell Populations and Temporal Order of Perturbed Pathways in Breast Cancer Brain Metastases. - Yifeng Tao; Haoyun Lei; Adrian V. Lee; Jian Ma 004; Russell Schwartz (ISMCO, 2019)

Automatic Human-like Mining and Constructing Reliable Genetic Association Database with Deep Reinforcement Learning. - Haohan Wang; Xiang Liu 017; Yifeng Tao; Wenting Ye; Qiao Jin 001; William W. Cohen; Eric P. Xing (PSB, 2019)

Predicting Drug Sensitivity of Cancer Cell Lines via Collaborative Filtering with Contextual Attention. - Yifeng Tao; Shuangxia Ren; Michael Q. Ding; Russell Schwartz; Xinghua Lu 001 (MLHC, 2020)

From Genome to Phenome: Predicting Multiple Cancer Phenotypes Based on Somatic GenomicAlterations via the Genomic Impact Transformer. - Yifeng Tao; Chunhui Cai; William W. Cohen; Xinghua Lu 001 (PSB, 2020)

Robust and accurate deconvolution of tumor populations uncovers evolutionary mechanisms of breast cancer metastasis. - Yifeng Tao; Haoyun Lei; Xuecong Fu; Adrian V. Lee; Jian Ma 004; Russell Schwartz (Bioinform., 2020)

A LSTM Algorithm Estimating Pseudo Measurements for Aiding INS during GNSS Signal Outages. - Wei Fang; Jinguang Jiang; Shuangqiu Lu; Yilin Gong; Yifeng Tao; Yanan Tang; Peihui Yan; Haiyong Luo; Jingnan Liu (Remote. Sens., 2020)

Tumor heterogeneity assessed by sequencing and fluorescence in situ hybridization (FISH) data. - Haoyun Lei; E. Michael Gertz; Alejandro A. Schäffer; Xuecong Fu; Yifeng Tao; Kerstin Heselmeyer-Haddad; Irianna Torres; Guibo Li; Liqin Xu; Yong Hou; Kui Wu 005; Xulian Shi; et al. (Bioinform., 2021)

Joint Clustering of Single-Cell Sequencing and Fluorescence In Situ Hybridization Data for Reconstructing Clonal Heterogeneity in Cancers. - Xuecong Fu; Haoyun Lei; Yifeng Tao; Kerstin Heselmeyer-Haddad; Irianna Torres; Michael Dean; Thomas Ried; Russell Schwartz (J. Comput. Biol., 2021)

Assessing the contribution of tumor mutational phenotypes to cancer progression risk. - Yifeng Tao; Ashok Rajaraman; Xiaoyue Cui; Ziyi Cui; Haoran Chen; Yuanqi Zhao; Jesse Eaton; Hannah Kim 003; Jian Ma 004; Russell Schwartz (PLoS Comput. Biol., 2021)

Reconstructing tumor clonal lineage trees incorporating single-nucleotide variants, copy number alterations and structural variations. - Xuecong Fu; Haoyun Lei; Yifeng Tao; Russell Schwartz (Bioinform., 2022)

Semi-deconvolution of bulk and single-cell RNA-seq data with application to metastatic progression in breast cancer. - Haoyun Lei; Xiaoyan A. Guo; Yifeng Tao; Kai Ding; Xuecong Fu; Steffi Oesterreich; Adrian V. Lee; Russell Schwartz (Bioinform., 2022)

A GRU and AKF-Based Hybrid Algorithm for Improving INS/GNSS Navigation Accuracy during GNSS Outage. - Yanan Tang; Jinguang Jiang; Jianghua Liu; Peihui Yan; Yifeng Tao; Jingnan Liu (Remote. Sens., 2022)

Genome-Driven Personalized Medicine of Cancer via Machine Learning and Phylogenetic Models - Yifeng Tao (2023)