Pathway Switching Explains the Sharp Response Characteristic of Hypoxia Response Network. - Yihai Yu; Guanyu Wang; Rahul Simha; Weiqun Peng; Frank Turano; Chen Zeng (PLoS Comput. Biol., 2007)

KINSOLVER: A simulator for computing large ensembles of biochemical and gene regulatory networks. - Boanerges Aleman-Meza; Yihai Yu; Heinz-Bernd Schüttler; Jonathan P. Arnold; Thiab R. Taha (Comput. Math. Appl., 2009)