Kernel Cox Regression Models for Linking Gene Expression Profiles to Censored Survival Data. - Hongzhe Li; Yihui Luan (Pacific Symposium on Biocomputing, 2003)

Clustering of time-course gene expression data using a mixed-effects model with B-splines. - Yihui Luan; Hongzhe Li (Bioinform., 2003)

Model-based methods for identifying periodically expressed genes based on time course microarray gene expression data. - Yihui Luan; Hongzhe Li (Bioinform., 2004)

Boosting proportional hazards models using smoothing splines, with applications to high-dimensional microarray data. - Hongzhe Li; Yihui Luan (Bioinform., 2005)

Comparison of Different Methods for Handling Linkage Disequilibrium in Genetic-Association Analyses via Simulation. - Yongke Wang; Wenhui Wang 003; Yihui Luan (BMEI, 2009)

Usefulness and limitations of dK random graph models to predict interactions and functional homogeneity in biological networks under a pseudo-likelihood parameter estimation approach. - Wenhui Wang 003; Juan Nunez-Iglesias; Yihui Luan; Fengzhu Sun (BMC Bioinform., 2009)

The Power of Detecting Enriched Patterns: An HMM Approach. - Zhiyuan Zhai; Shih-Yen Ku; Yihui Luan; Gesine Reinert; Michael S. Waterman; Fengzhu Sun (J. Comput. Biol., 2010)

Variance adjusted weighted UniFrac: a powerful beta diversity measure for comparing communities based on phylogeny. - Qin Chang; Yihui Luan; Fengzhu Sun (BMC Bioinform., 2011)

Normal and Compound Poisson Approximations for Pattern Occurrences in NGS Reads. - Zhiyuan Zhai; Gesine Reinert; Kai Song; Michael S. Waterman; Yihui Luan; Fengzhu Sun (J. Comput. Biol., 2012)

DV-Curve Representation of Protein Sequences and Its Application. - Wei Deng; Yihui Luan (Comput. Math. Methods Medicine, 2014)

An adaptive integrated algorithm for noninvasive fetal ECG separation and noise reduction based on ICA-EEMD-WS. - Guangchen Liu; Yihui Luan (Medical Biol. Eng. Comput., 2015)

Classified mixed logistic model prediction. - Hanmei Sun; Thuan Nguyen; Yihui Luan; Jiming Jiang (J. Multivar. Anal., 2018)

Statistical significance approximation for local similarity analysis of dependent time series data. - Fang Zhang; Fengzhu Sun; Yihui Luan (BMC Bioinform., 2019)

Identifying local associations in biological time series: algorithms, statistical significance, and applications. - Dongmei Ai; Lulu Chen; Jiemin Xie; Longwei Cheng; Fang Zhang; Yihui Luan; Yang Li; Shengwei Hou; Fengzhu Sun; Li Charlie Xia (Briefings Bioinform., 2023)