Small RNAs in angiosperms: sequence characteristics, distribution and generation. - Dijun Chen; Yijun Meng; Xiaoxia Ma; Chuanzao Mao; Youhuang Bai; Junjie Cao 002; Haibin Gu; Ping Wu; Ming Chen 005 (Bioinform., 2010)

Functional characterization of plant small RNAs based on next-generation sequencing data. - Ming Chen 005; Yijun Meng; Haibin Gu; Dijun Chen (Comput. Biol. Chem., 2010)

Toward microRNA-mediated gene regulatory networks in plants. - Yijun Meng; Chaogang Shao; Ming Chen 005 (Briefings Bioinform., 2011)

PRIN, a predicted rice interactome network. - Haibin Gu; Pengcheng Zhu; Yinming Jiao; Yijun Meng; Ming Chen 005 (BMC Bioinform., 2011)

PmiRKB: a plant microRNA knowledge base. - Yijun Meng; Lingfeng Gou; Dijun Chen; Chuanzao Mao; Yongfeng Jin; Ping Wu; Ming Chen 005 (Nucleic Acids Res., 2011)

PlantNATsDB: a comprehensive database of plant natural antisense transcripts. - Dijun Chen; Chunhui Yuan; Jian Zhang; Zhao Zhang 012; Lin Bai; Yijun Meng; Ling-Ling Chen; Ming Chen 005 (Nucleic Acids Res., 2012)

A reversed framework for the identification of microRNA-target pairs in plants. - Chaogang Shao; Ming Chen 005; Yijun Meng (Briefings Bioinform., 2013)

Construction of regulatory networks mediated by small RNAs responsive to abiotic stresses in rice (Oryza sativa). - Jingping Qin; Xiaoxia Ma; Zhonghai Tang; Yijun Meng (Comput. Biol. Chem., 2015)

Investigating microRNA-mediated regulation of the nascent nuclear transcripts in plants: a bioinformatics workflow. - Dongliang Yu; Zhonghai Tang; Chaogang Shao; Xiaoxia Ma; Taihe Xiang; Zhihong Fan; Huizhong Wang; Yijun Meng (Briefings Bioinform., 2018)

MepmiRDB: a medicinal plant microRNA database. - Dongliang Yu; Jiangjie Lu; Weishan Shao; Xiaoxia Ma; Tian Xie; Hidetaka Ito; Tingzhang Wang; Min Xu; Huizhong Wang; Yijun Meng (Database J. Biol. Databases Curation, 2019)

Bioinformatics-assisted, integrated omics studies on medicinal plants. - Xiaoxia Ma; Yijun Meng; Pu Wang; Zhonghai Tang; Huizhong Wang; Tian Xie (Briefings Bioinform., 2020)