Interactive Similarity-Based Search of Clinical Trials. - Yingcheng Sun; Jiaqi Tang 008; Alex Butler; Cong Liu 020; Yilu Fang; Chunhua Weng (MedInfo, 2021)

Participatory Design of a Clinical Trial Eligibility Criteria Simplification Method. - Yilu Fang; Jae Hyun Kim; Betina Ross S. Idnay; Rebeca Aragon Garcia; Carmen E. Castillo; Yingcheng Sun; Hao Liu 054; Cong Liu 020; Chi Yuan; Chunhua Weng (MIE, 2021)

Optimizing Clinical Research Eligibility Prescreening: An Iterative Usability Evaluation of an NLP-driven Cohort Identification Tool. - Betina Ross S. Idnay; Yilu Fang; Caitlin N. Dreisbach; Karen Marder; Chunhua Weng; Rebecca Schnall (AMIA, 2022)

Criteria2Query 2.0: Combining Machine Efficiency and Human Intelligence to Define a More Accurate and Feasible Cohort for Clinical Trial Recruitment. - Betina Ross S. Idnay; Yilu Fang; Yingcheng Sun; Hao Liu 054; Zhehuan Chen; Rebecca Schnall; Chunhua Weng (AMIA, 2022)

Data-Driven Modeling of Randomized Controlled Trial Outcomes. - Zhehuan Chen; Yilu Fang; Hao Liu 054; Chunhua Weng (MIE, 2022)

Combining human and machine intelligence for clinical trial eligibility querying. - Yilu Fang; Betina Ross S. Idnay; Yingcheng Sun; Hao Liu 054; Zhehuan Chen; Karen Marder; Hua Xu 001; Rebecca Schnall; Chunhua Weng (J. Am. Medical Informatics Assoc., 2022)

Clinical and temporal characterization of COVID-19 subgroups using patient vector embeddings of electronic health records. - Casey N. Ta; Jason E. Zucker; Po-Hsiang Chiu; Yilu Fang; Karthik Natarajan; Chunhua Weng (J. Am. Medical Informatics Assoc., 2023)

Clinical research staff perceptions on a natural language processing-driven tool for eligibility prescreening: An iterative usability assessment. - Betina Ross S. Idnay; Yilu Fang; Caitlin N. Dreisbach; Karen Marder; Chunhua Weng; Rebecca Schnall (Int. J. Medical Informatics, 2023)

A data-driven approach to optimizing clinical study eligibility criteria. - Yilu Fang; Hao Liu 054; Betina Ross S. Idnay; Casey N. Ta; Karen Marder; Chunhua Weng (J. Biomed. Informatics, 2023)

A MapReduce Approach to Effectively Utilize Long Context Information in Retrieval Augmented Language Models. - Gongbo Zhang; Zihan Xu; Qiao Jin 001; Fangyi Chen; Yilu Fang; Yi Liu 059; Justin F. Rousseau; Ziyang Xu; Zhiyong Lu; Chunhua Weng; Yifan Peng 002 (CoRR, 2024)

Semi-Supervised Learning from Small Annotated Data and Large Unlabeled Data for Fine-grained PICO Entity Recognition. - Fangyi Chen; Gongbo Zhang; Yilu Fang; Yifan Peng 002; Chunhua Weng (CoRR, 2024)

Knowledge-guided generative artificial intelligence for automated taxonomy learning from drug labels. - Yilu Fang; Patrick Ryan; Chunhua Weng (J. Am. Medical Informatics Assoc., 2024)

Sociotechnical feasibility of natural language processing-driven tools in clinical trial eligibility prescreening for Alzheimer's disease and related dementias. - Betina Ross S. Idnay; Jianfang Liu; Yilu Fang; Alex Hernandez; Shivani Kaw; Alicia Etwaru; Janeth Juarez Padilla; Sergio Ozoria Ramirez; Karen Marder; Chunhua Weng; Rebecca Schnall (J. Am. Medical Informatics Assoc., 2024)

Promoting equity in clinical research: The role of social determinants of health. - Betina Idnay; Yilu Fang; Edward Stanley; Brenda Ruotolo; Wendy K. Chung; Karen Marder; Chunhua Weng (J. Biomed. Informatics, 2024)

Criteria2Query 3.0: Leveraging generative large language models for clinical trial eligibility query generation. - Jimyung Park; Yilu Fang; Casey N. Ta; Gongbo Zhang; Betina Idnay; Fangyi Chen; David Feng; Rebecca Shyu; Emily R. Gordon; Matthew E. Spotnitz; Chunhua Weng (J. Biomed. Informatics, 2024)

Semi-supervised learning from small annotated data and large unlabeled data for fine-grained Participants, Intervention, Comparison, and Outcomes entity recognition. - Fangyi Chen; Gongbo Zhang; Yilu Fang; Yifan Peng 002; Chunhua Weng (J. Am. Medical Informatics Assoc., 2025)

Leveraging long context in retrieval augmented language models for medical question answering. - Gongbo Zhang; Zihan Xu; Qiao Jin 001; Fangyi Chen; Yilu Fang; Yi Liu 059; Justin F. Rousseau; Ziyang Xu; Zhiyong Lu; Chunhua Weng; Yifan Peng 002 (npj Digit. Medicine, 2025)