An Adaptive Resolution Tree Visualization of Large Influenza Virus Sequence Datasets. - Leonid Zaslavsky; Yiming Bao; Tatiana A. Tatusova (ISBRA, 2007)

FLAN: a web server for influenza virus genome annotation. - Yiming Bao; Pavel Bolotov; Dmitry Dernovoy; Boris Kiryutin; Tatiana A. Tatusova (Nucleic Acids Res., 2007)

Visualization of large influenza virus sequence datasets using adaptively aggregated trees with sampling-based subscale representation. - Leonid Zaslavsky; Yiming Bao; Tatiana A. Tatusova (BMC Bioinform., 2008)

Virus Variation Resource - recent updates and future directions. - J. Rodney Brister; Yiming Bao; Sergey A. Zhdanov; Yuri Ostapchuck; Vyacheslav Chetvernin; Boris Kiryutin; Leonid Zaslavsky; Michael Kimelman; Tatiana A. Tatusova (Nucleic Acids Res., 2014)

NCBI Viral Genomes Resource. - J. Rodney Brister; Danso Ako-Adjei; Yiming Bao; Olga Blinkova (Nucleic Acids Res., 2015)

Reference sequence (RefSeq) database at NCBI: current status, taxonomic expansion, and functional annotation. - Nuala A. O'Leary; Mathew W. Wright; J. Rodney Brister; Stacy Ciufo; Diana Haddad; Richard McVeigh; Bhanu Rajput; Barbara Robbertse; Brian Smith-White; Danso Ako-Adjei; Alexander Astashyn; Azat Badretdin; et al. (Nucleic Acids Res., 2016)

Virus Variation Resource - improved response to emergent viral outbreaks. - Eneida Hatcher; Sergey A. Zhdanov; Yiming Bao; Olga Blinkova; Eric P. Nawrocki; Yuri Ostapchuck; Alejandro A. Schäffer; J. Rodney Brister (Nucleic Acids Res., 2017)

MethBank 3.0: a database of DNA methylomes across a variety of species. - Rujiao Li; Fang Liang; Mengwei Li; Dong Zou; Shixiang Sun; Yongbing Zhao; Wenming Zhao; Yiming Bao; Jing-Fa Xiao; Zhang Zhang 002 (Nucleic Acids Res., 2018)

ICG: a wiki-driven knowledgebase of internal control genes for RT-qPCR normalization. - Jian Sang; Zhennan Wang; Man Li; Jiabao Cao; Guangyi Niu; Lin Xia; Dong Zou; Fan Wang; Xingjian Xu; Xiaojiao Han; Jinqi Fan; Ye Yang; et al. (Nucleic Acids Res., 2018)

Genome Variation Map: a data repository of genome variations in BIG Data Center. - Shuhui Song; Dongmei Tian; Cuiping Li 004; Bixia Tang; Lili Dong; Jing-Fa Xiao; Yiming Bao; Wenming Zhao; Hang He; Zhang Zhang 002 (Nucleic Acids Res., 2018)

Characterization and identification of long non-coding RNAs based on feature relationship. - Guangyu Wang; Hongyan Yin; Boyang Li 011; Chunlei Yu; Fan Wang; Xingjian Xu; Jiabao Cao; Yiming Bao; Liguo Wang 002; Amir Ali Abbasi; Vladimir B. Bajic; Lina Ma; et al. (Bioinform., 2019)

EWAS Atlas: a curated knowledgebase of epigenome-wide association studies. - Mengwei Li; Dong Zou; Zhaohua Li; Ran Gao; Jian Sang; Yuansheng Zhang; Rujiao Li; Lin Xia; Tao Zhang 026; Guangyi Niu; Yiming Bao; Zhang Zhang 002 (Nucleic Acids Res., 2019)

iDog: an integrated resource for domestic dogs and wild canids. - Bixia Tang; Qing Zhou; Lili Dong; Wulue Li; Xiangquan Zhang; Li Lan; Shuang Zhai; Jing-Fa Xiao; Zhang Zhang 002; Yiming Bao; Ya-Ping Zhang; Guo-Dong Wang; et al. (Nucleic Acids Res., 2019)

NucMap: a database of genome-wide nucleosome positioning map across species. - Yongbing Zhao; Jinyue Wang; Fang Liang; Yanxia Liu; Qi Wang 072; Hao Zhang; Meiye Jiang; Zhewen Zhang; Wenming Zhao; Yiming Bao; Zhang Zhang 002; Jiayan Wu; et al. (Nucleic Acids Res., 2019)

The Elements of Data Sharing. - Zhang Zhang 002; Shuhui Song; Jun Yu 004; Wenming Zhao; Jing-Fa Xiao; Yiming Bao (Genom. Proteom. Bioinform., 2020)

Population Genetics of SARS-CoV-2: Disentangling Effects of Sampling Bias and Infection Clusters. - Qi Liu 048; Shilei Zhao; Chengmin Shi; Shuhui Song; Sihui Zhu; Yankai Su; Wenming Zhao; Mingkun Li; Yiming Bao; Yongbiao Xue; Hua Chen 010 (Genom. Proteom. Bioinform., 2020)

The Global Landscape of SARS-CoV-2 Genomes, Variants, and Haplotypes in 2019nCoVR. - Shuhui Song; Lina Ma; Dong Zou; Dongmei Tian; Cuiping Li 004; Junwei Zhu; Meili Chen; Anke Wang; Yingke Ma; Mengwei Li; Xufei Teng; Ying Cui; et al. (Genom. Proteom. Bioinform., 2020)

EWAS Data Hub: a resource of DNA methylation array data and metadata. - Zhuang Xiong; Mengwei Li; Fei Yang; Yingke Ma; Jian Sang; Rujiao Li; Zhaohua Li; Zhang Zhang 002; Yiming Bao (Nucleic Acids Res., 2020)

Prior-Attention Residual Learning for More Discriminative COVID-19 Screening in CT Images. - Jun Wang 072; Yiming Bao; Yaofeng Wen; Hongbing Lu; Hu Luo; Yunfei Xiang; Xiaoming Li; Chen Liu 026; Dahong Qian (IEEE Trans. Medical Imaging, 2020)

C3D-UNET: A Comprehensive 3D Unet for Covid-19 Segmentation with Intact Encoding and Local Attention. - Yiming Bao; Hexiang Zeng; Chengfeng Zhou; Chen Liu 026; Lichi Zhang; Dahong Qian; Jun Wang 072; Hongbing Lu (EMBC, 2021)

Self-adaptive Transfer Learning for Multicenter Glaucoma Classification in Fundus Retina Images. - Yiming Bao; Jun Wang 072; Tong Li; Linyan Wang; Jianwei Xu; Juan Ye; Dahong Qian (OMIA@MICCAI, 2021)

A real-time system using deep learning to detect and track ureteral orifices during urinary endoscopy. - Dingyi Liu; Xin Peng 008; Xiaoqing Liu; Yiming Li; Yiming Bao; Jianwei Xu; Xianzhang Bian; Wei Xue; Dahong Qian (Comput. Biol. Medicine, 2021)

Self-Adaptive Transfer Learning for Multicenter Glaucoma Classification in Fundus Retina Images. - Yiming Bao; Jun Wang; Tong Li; Linyan Wang; Jianwei Xu; Juan Ye; Dahong Qian (CoRR, 2021)

The Genome Sequence Archive Family: Toward Explosive Data Growth and Diverse Data Types. - Tingting Chen; Xu Chen 037; Sisi Zhang; Junwei Zhu; Bixia Tang; Anke Wang; Lili Dong; Zhewen Zhang; Caixia Yu; Yanling Sun; Lianjiang Chi; Huanxin Chen; et al. (Genom. Proteom. Bioinform., 2021)

Genome Warehouse: A Public Repository Housing Genome-scale Data. - Meili Chen; Yingke Ma; Song Wu; Xinchang Zheng; Hongen Kang; Jian Sang; Xingjian Xu; Lili Hao; Zhaohua Li; Zheng Gong; Jing-Fa Xiao; Zhang Zhang 002; et al. (Genom. Proteom. Bioinform., 2021)

Genomic Epidemiology of SARS-CoV-2 in Pakistan. - Shuhui Song; Cuiping Li 004; Lu Kang; Dongmei Tian; Nazish Badar; Wentai Ma; Shilei Zhao; Xuan Jiang; Chun Wang; Yongqiao Sun; Wenjie Li; Meng Lei; et al. (Genom. Proteom. Bioinform., 2021)

Aging Atlas: a multi-omics database for aging biology. - Guang-Hui Liu; Yiming Bao; Jing Qu; Weiqi Zhang; Tao Zhang; Wang Kang; Fei Yang; Qianzhao Ji; Xiaoyu Jiang; Yingke Ma; Shuai Ma; Zunpeng Liu; et al. (Nucleic Acids Res., 2021)

Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2021. - Yongbiao Xue; Yiming Bao; Zhang Zhang 002; Wenming Zhao; Jing-Fa Xiao; Shunmin He; Guoqing Zhang 006; Yixue Li; Guoping Zhao; Runsheng Chen; Shuhui Song; Lina Ma; et al. (Nucleic Acids Res., 2021)

Genomic Perspectives on the Emerging SARS-CoV-2 Omicron Variant. - Wentai Ma; Jing Yang; Haoyi Fu; Chao Su; Caixia Yu; Qihui Wang; Ana Tereza Ribeiro de Vasconcelos; Georgii A. Bazykin; Yiming Bao; Mingkun Li (Genom. Proteom. Bioinform., 2022)

CeDR Atlas: a knowledgebase of cellular drug response. - Yin-Ying Wang; Hongen Kang; Tianyi Xu; Lili Hao; Yiming Bao; Peilin Jia (Nucleic Acids Res., 2022)

EWAS Open Platform: integrated data, knowledge and toolkit for epigenome-wide association study. - Zhuang Xiong; Fei Yang; Mengwei Li; Yingke Ma; Wei Zhao 040; Guoliang Wang; Zhaohua Li; Xinchang Zheng; Dong Zou; Wenting Zong; Hongen Kang; Yaokai Jia; et al. (Nucleic Acids Res., 2022)

Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2022. - Yongbiao Xue; Yiming Bao; Zhang Zhang 002; Wenming Zhao; Jing-Fa Xiao; Shunmin He; Guoqing Zhang 006; Yixue Li; Guoping Zhao; Runsheng Chen; Jingyao Zeng; Yadong Zhang; et al. (Nucleic Acids Res., 2022)

Gene Expression Nebulas (GEN): a comprehensive data portal integrating transcriptomic profiles across multiple species at both bulk and single-cell levels. - Yuansheng Zhang; Dong Zou; Tongtong Zhu; Tianyi Xu; Ming Chen; Guangyi Niu; Wenting Zong; Rong Pan; Wei Jing; Jian Sang; Chang Liu 082; Yujia Xiong; et al. (Nucleic Acids Res., 2022)

scMethBank: a database for single-cell whole genome DNA methylation maps. - Wenting Zong; Hongen Kang; Zhuang Xiong; Yingke Ma; Tong Jin 004; Zheng Gong; Lizhi Yi; Mochen Zhang; Song Wu; Guoliang Wang; Yiming Bao; Rujiao Li (Nucleic Acids Res., 2022)

Ongoing Positive Selection Drives the Evolution of SARS-CoV-2 Genomes. - Yali Hou; Shilei Zhao; Qi Liu 048; Xiaolong Zhang; Tong Sha; Yankai Su; Wenming Zhao; Yiming Bao; Yongbiao Xue; Hua Chen 010 (Genom. Proteom. Bioinform., 2022)

RSB-Pose: Robust Short-Baseline Binocular 3D Human Pose Estimation with Occlusion Handling. - Xiaoyue Wan; Zhuo Chen; Yiming Bao; Xu Zhao 001 (CoRR, 2023)

From BIG Data Center to China National Center for Bioinformation. - Yiming Bao; Yongbiao Xue (Genom. Proteom. Bioinform., 2023)

RCoV19: A One-Stop Hub for SARS-CoV-2 Genome Data Integration, Variant Monitoring, and Risk Pre-Warning. - Cuiping Li 004; Lina Ma; Dong Zou; Rongqin Zhang; Xue Bai; Lun Li; Gangao Wu; Tianhao Huang; Wei Zhao 040; Enhui Jin; Yiming Bao; Shuhui Song (Genom. Proteom. Bioinform., 2023)

Database Commons: A Catalog of Worldwide Biological Databases. - Lina Ma; Dong Zou; Lin Liu; Huma Shireen; Amir Ali Abbasi; Alex Bateman; Jing-Fa Xiao; Wenming Zhao; Yiming Bao; Zhang Zhang 002 (Genom. Proteom. Bioinform., 2023)

FusePose: IMU-Vision Sensor Fusion in Kinematic Space for Parametric Human Pose Estimation. - Yiming Bao; Xu Zhao 001; Dahong Qian (IEEE Trans. Multim., 2023)

HGD: an integrated homologous gene database across multiple species. - Guangya Duan; Gangao Wu; Xiaoning Chen; Dongmei Tian; Zhaohua Li; Yanling Sun; Zhenglin Du; Lili Hao; Shuhui Song; Yuan Gao; Jing-Fa Xiao; Zhang Zhang 002; et al. (Nucleic Acids Res., 2023)

Cell Taxonomy: a curated repository of cell types with multifaceted characterization. - Shuai Jiang; Qiheng Qian; Tongtong Zhu; Wenting Zong; Yunfei Shang; Tong Jin 004; Yuansheng Zhang; Ming Chen; Zishan Wu; Yuan Chu; Rongqin Zhang; Sicheng Luo; et al. (Nucleic Acids Res., 2023)

Brain Catalog: a comprehensive resource for the genetic landscape of brain-related traits. - Siyu Pan; Hongen Kang; Xinxuan Liu; Shiqi Lin; Na Yuan; Zhang Zhang 002; Yiming Bao; Peilin Jia (Nucleic Acids Res., 2023)

ASCancer Atlas: a comprehensive knowledgebase of alternative splicing in human cancers. - Song Wu; Yue Huang; Mochen Zhang; Zheng Gong; Guoliang Wang; Xinchang Zheng; Wenting Zong; Wei Zhao; Peiqi Xing; Rujiao Li; Zhaoqi Liu; Yiming Bao (Nucleic Acids Res., 2023)

MethBank 4.0: an updated database of DNA methylation across a variety of species. - Mochen Zhang; Wenting Zong; Dong Zou; Guoliang Wang; Wei Zhao 040; Fei Yang; Song Wu; Xinran Zhang; Xutong Guo; Yingke Ma; Zhuang Xiong; Zhang Zhang 002; et al. (Nucleic Acids Res., 2023)

McAN: a novel computational algorithm and platform for constructing and visualizing haplotype networks. - Lun Li; Bo Xu; Dongmei Tian; Anke Wang; Junwei Zhu; Cuiping Li 004; Na Li; Wei Zhao 040; Leisheng Shi; Yongbiao Xue; Zhang Zhang 002; Yiming Bao; et al. (Briefings Bioinform., 2023)

AIM 2024 Challenge on UHD Blind Photo Quality Assessment. - Vlad Hosu; Marcos V. Conde; Lorenzo Agnolucci; Nabajeet Barman; Saman Zadtootaghaj; Radu Timofte; Wei Sun 029; Weixia Zhang; Yuqin Cao; Linhan Cao; Jun Jia; Zijian Chen 001; et al. (ECCV Workshops (10), 2024)

Learning from Strong to Weak An Enhanced Quality Comparison Network via Efficient Transfer Learning. - Yunchen Zhang; Xiangkai Xu; Hong Gao; Ji Shi; Yiming Bao; Xiugang Dong; Xiangsheng Zhou; Yaofeng Tu (ECCV Workshops (10), 2024)

Hybrid 3D Human Pose Estimation with Monocular Video and Sparse IMUs. - Yiming Bao; Xu Zhao 001; Dahong Qian (CoRR, 2024)

GenBase: A Nucleotide Sequence Database. - Congfan Bu; Xinchang Zheng; Xuetong Zhao; Tianyi Xu; Xue Bai; Yaokai Jia; Meili Chen; Lili Hao; Jing-Fa Xiao; Zhang Zhang 002; Wenming Zhao; Bixia Tang; et al. (Genom. Proteom. Bioinform., 2024)

Joint-Limb Compound Triangulation With Co-Fixing for Stereoscopic Human Pose Estimation. - Zhuo Chen; Xiaoyue Wan; Yiming Bao; Xu Zhao 001 (IEEE Trans. Multim., 2024)

NTIRE 2025 Challenge on Short-form UGC Video Quality Assessment and Enhancement: Methods and Results. - Xin Li; Kun Yuan; Bingchen Li; Fengbin Guan; Yizhen Shao; Zihao Yu; Xijun Wang; Yiting Lu; Wei Luo; Suhang Yao; Ming Sun; Chao Zhou; et al. (CVPR Workshops, 2025)

The Updated Genome Warehouse: Enhancing Data Value, Security, and Usability to Address Data Expansion. - Yingke Ma; Xuetong Zhao; Yaokai Jia; Zhenxian Han; Caixia Yu; Zhuojing Fan; Zhang Zhang 002; Jingfa Xiao; Wenming Zhao; Yiming Bao; Meili Chen (Genom. Proteom. Bioinform., 2025)

VISTA: A Tool for Fast Taxonomic Assignment of Viral Genome Sequences. - Tao Zhang 026; Yiyun Liu; Xutong Guo; Xinran Zhang; Xinchang Zheng; Mochen Zhang; Yiming Bao (Genom. Proteom. Bioinform., 2025)

Navigating COP16's digital sequence information outcomes: What researchers need to do in practice. - Melania Muñoz-García; K. C. Bansal; Yiming Bao; Sarah C. Brinkley; Elena Buzan; David Castle; Martha Lucía Cepeda-Hernández; Solenne Correard; Andrew J. Crawford; Jessica M. da Silva; Manuela da Silva; Sonigitu Ekpe; et al. (Patterns, 2025)

NTIRE 2025 Challenge on Short-form UGC Video Quality Assessment and Enhancement: Methods and Results. - Xin Li; Kun Yuan 003; Bingchen Li; Fengbin Guan; Yizhen Shao; Zihao Yu; Xijun Wang; Yiting Lu; Wei Luo; Suhang Yao; Ming Sun; Chao Zhou; et al. (CoRR, 2025)

APVR: Hour-Level Long Video Understanding with Adaptive Pivot Visual Information Retrieval. - Hong Gao; Yiming Bao; Xuezhen Tu; Bin Zhong; Minling Zhang (CoRR, 2025)