Characterizing Renal Structures with 3D Block Aggregate Transformers. - Xin Yu 010; Yucheng Tang; Yinchi Zhou; Riqiang Gao; Qi Yang 004; Ho Hin Lee; Thomas Z. Li; Shunxing Bao; Yuankai Huo; Zhoubing Xu; Thomas A. Lasko; Richard G. Abramson; et al. (CoRR, 2022)

Multi-Contrast Computed Tomography Atlas of Healthy Pancreas. - Yinchi Zhou; Ho Hin Lee; Yucheng Tang; Xin Yu 010; Qi Yang 004; Shunxing Bao; Jeffrey M. Spraggins; Yuankai Huo; Bennett A. Landman (CoRR, 2023)

UNesT: Local spatial representation learning with hierarchical transformer for efficient medical segmentation. - Xin Yu 010; Qi Yang 004; Yinchi Zhou; Leon Y. Cai; Riqiang Gao; Ho Hin Lee; Thomas Z. Li; Shunxing Bao; Zhoubing Xu; Thomas A. Lasko; Richard G. Abramson; Zizhao Zhang; et al. (Medical Image Anal., 2023)

Self-supervised Pre-training Tasks for an fMRI Time-Series Transformer in Autism Detection. - Yinchi Zhou; Peiyu Duan; Yuexi Du; Nicha C. Dvornek (MLCN@MICCAI, 2024)

PDM: A Plug-and-Play Perturbed Multi-path Diffusion Module for Simultaneous Medical Image Segmentation Improvement and Uncertainty Estimation. - Bo Zhou 009; Tianqi Chen; Jun Hou; Yinchi Zhou; Huidong Xie; Chi Liu 001; James S. Duncan (MLMI@MICCAI (1), 2024)

POUR-Net: A Population-Prior-Aided Over-Under-Representation Network for Low-Count PET Attenuation Map Generation. - Bo Zhou 009; Jun Hou; Tianqi Chen; Yinchi Zhou; Xiongchao Chen; Huidong Xie; Qiong Liu; Xueqi Guo; Yu-Jung Tsai; Vladimir Y. Panin; Takuya Toyonaga; James S. Duncan; et al. (CoRR, 2024)

2.5D Multi-view Averaging Diffusion Model for 3D Medical Image Translation: Application to Low-count PET Reconstruction with CT-less Attenuation Correction. - Tianqi Chen; Jun Hou; Yinchi Zhou; Huidong Xie; Xiongchao Chen; Qiong Liu; Xueqi Guo; Menghua Xia; James S. Duncan; Chi Liu 001; Bo Zhou 009 (CoRR, 2024)

Cascaded Multi-path Shortcut Diffusion Model for Medical Image Translation. - Yinchi Zhou; Tianqi Chen; Jun Hou; Huidong Xie; Nicha C. Dvornek; S. Kevin Zhou; David L. Wilson; James S. Duncan; Chi Liu 001; Bo Zhou 009 (Medical Image Anal., 2024)

Fed-NDIF: A Noise-Embedded Federated Diffusion Model For Low-Count Whole-Body PET Denoising. - Yinchi Zhou; Huidong Xie; Menghua Xia; Qiong Liu; Bo Zhou 009; Tianqi Chen; Jun Hou; Liang Guo; Xinyuan Zheng; Hanzhong Wang; Biao Li; Axel Rominger; et al. (CoRR, 2025)

POUR-Net: A Population-Prior-Aided Over-Under-Representation Network for Low-Count PET Attenuation Map Generation. - Bo Zhou 009; Jun Hou; Tianqi Chen; Yinchi Zhou; Xiongchao Chen; Huidong Xie; Qiong Liu; Xueqi Guo; Menghua Xia; Yu-Jung Tsai; Vladimir Y. Panin; Takuya Toyonaga; et al. (IEEE Trans. Medical Imaging, 2025)