Improving contig binning of metagenomic data using (d2S) oligonucleotide frequency dissimilarity. - Ying Wang 005; Kun Wang; Yang Young Lu; Fengzhu Sun (BMC Bioinform., 2017)

Stability for Sampled-Data Systems with Delay and Applications for Networked Control Systems. - Cao Huang; Huiyu Jin; Ying Wang 005 (CSAE, 2018)

CRAFT: Compact genome Representation toward large-scale Alignment-Free daTabase. - Yang Young Lu; Jiaxing Bai; Yiwen Wang; Ying Wang 005; Fengzhu Sun (Bioinform., 2021)

MAT2: manifold alignment of single-cell transcriptomes with cell triplets. - Jinglong Zhang; Xu Zhang; Ying Wang 005; Feng Zeng; Xing-Ming Zhao (Bioinform., 2021)

Metric learning for comparing genomic data with triplet network. - Zhi Ma; Yang Young Lu; Yiwen Wang; Renhao Lin; Zizi Yang; Fang Zhang; Ying Wang 005 (Briefings Bioinform., 2022)

BIOTIC: a Bayesian framework to integrate single-cell multi-omics for transcription factor activity inference and improve identity characterization of cells. - Lan Cao; Wenhao Zhang; Fan Yang; Shengquan Chen; Xiaobing Huang; Feng Zeng; Ying Wang 005 (Briefings Bioinform., 2024)

ViTax: adaptive hierarchical viral taxonomy classification with a taxonomy belief tree on a foundation model. - Yushuang He; Feng Zhou 021; Jiaxing Bai; Yichun Gao; Xiaobing Huang; Ying Wang 005 (Briefings Bioinform., 2024)

AquaGS: An integrated GUI pipeline for genomic selection in aquaculture breeding. - Chengwei Liang; Junyu Liu; Wenzhu Peng; Boyu Wang; Fan Yang; Weiwei You; Ying Wang 005 (SoftwareX, 2024)