R-MAT: A Recursive Model for Graph Mining. - Deepayan Chakrabarti; Yiping Zhan; Christos Faloutsos (SDM, 2004)

Model-P: a basecalling method for resequencing microarrays of diploid samples. - Yiping Zhan; David Kulp (ECCB/JBI, 2005)

Visualization of large networks with min-cut plots, A-plots and R-MAT. - Deepayan Chakrabarti; Christos Faloutsos; Yiping Zhan (Int. J. Hum. Comput. Stud., 2007)