SMART on FHIR Genomics: facilitating standardized clinico-genomic apps. - Gil Alterovitz; Jeremy L. Warner; Peijin Zhang; Yishen Chen; Mollie Ullman-Cullere; David A. Kreda; Isaac S. Kohane (J. Am. Medical Informatics Assoc., 2015)

BHive: A Benchmark Suite and Measurement Framework for Validating x86-64 Basic Block Performance Models. - Yishen Chen; Ajay Brahmakshatriya; Charith Mendis; Alex Renda; Eric Atkinson; Ondrej Sýkora; Saman P. Amarasinghe; Michael Carbin (IISWC, 2019)

DiffTune: Optimizing CPU Simulator Parameters with Learned Differentiable Surrogates. - Alex Renda; Yishen Chen; Charith Mendis; Michael Carbin (MICRO, 2020)

VeGen: a vectorizer generator for SIMD and beyond. - Yishen Chen; Charith Mendis; Michael Carbin; Saman P. Amarasinghe (ASPLOS, 2021)

All you need is superword-level parallelism: systematic control-flow vectorization with SLP. - Yishen Chen; Charith Mendis; Saman P. Amarasinghe (PLDI, 2022)

A Framework for Fine-Grained Program Versioning. - Yishen Chen; Saman P. Amarasinghe (MICRO, 2024)