Capybara: equivalence ClAss enumeration of coPhylogenY event-BAsed ReconciliAtions. - Yishu Wang 002; Arnaud Mary; Marie-France Sagot; Blerina Sinaimeri (Bioinform., 2020)

Lazy listing of equivalence classes - A paper on dynamic programming and tropical circuits. - Yishu Wang 002; Arnaud Mary; Marie-France Sagot; Blerina Sinaimeri (CoRR, 2020)

Making Sense of a Cophylogeny Output: Efficient Listing of Representative Reconciliations. - Yishu Wang 002; Arnaud Mary; Marie-France Sagot; Blerina Sinaimeri (WABI, 2021)

Algorithmic investigations of the dynamics of species interactions. (Investigations algorithmiques des interactions inter-espèces). - Yishu Wang 002 (2021)

Efficiently sparse listing of classes of optimal cophylogeny reconciliations. - Yishu Wang 002; Arnaud Mary; Marie-France Sagot; Blerina Sinaimeri (Algorithms Mol. Biol., 2022)

A General Framework for Enumerating Equivalence Classes of Solutions. - Yishu Wang 002; Arnaud Mary; Marie-France Sagot; Blerina Sinaimeri (Algorithmica, 2023)