Comprehensive quantitative analyses of the effects of promoter sequence elements on mRNA transcription. - Michal Lapidot; Yitzhak Pilpel (Nucleic Acids Res., 2003)

Characterization of the Effects of TF Binding Site Variations on Gene Expression Towards Predicting the Functional Outcomes of Regulatory SNPs. - Michal Lapidot; Yitzhak Pilpel (Systems Biology and Regulatory Genomics, 2005)

Examination of the tRNA Adaptation Index as a Predictor of Protein Expression Levels. - Orna Man; Joel L. Sussman; Yitzhak Pilpel (Systems Biology and Regulatory Genomics, 2005)

Control of Translation: Comparative Genomics and Mechanistic Aspects. - Yitzhak Pilpel; Orna Man (German Conference on Bioinformatics, 2007)

Nucleotide variation of regulatory motifs may lead to distinct expression patterns. - Liat Segal; Michal Lapidot; Zach Solan; Eytan Ruppin; Yitzhak Pilpel; David Horn 001 (ISMB/ECCB (Supplement of Bioinformatics), 2007)

Global and Local Architecture of the Mammalian microRNA-Transcription Factor Regulatory Network. - Reut Shalgi; Daniel Lieber; Moshe Oren; Yitzhak Pilpel (PLoS Comput. Biol., 2007)

Can Molecular Motors Drive Distance Measurements in Injured Neurons? - Naaman Kam; Yitzhak Pilpel; Mike Fainzilber (PLoS Comput. Biol., 2009)

Teasing Apart Translational and Transcriptional Components of Stochastic Variations in Eukaryotic Gene Expression. - Raheleh Salari; Damian Wójtowicz; Jie Zheng 002; David Levens; Yitzhak Pilpel; Teresa M. Przytycka (PLoS Comput. Biol., 2012)

The majority of endogenous microRNA targets within Alu elements avoid the microRNA machinery. - Yonit Hoffman; Dvir Dahary; Debora Rosa Bublik; Moshe Oren; Yitzhak Pilpel (Bioinform., 2013)

Measurements of the Impact of 3′ End Sequences on Gene Expression Reveal Wide Range and Sequence Dependent Effects. - Ophir Shalem; Lucas B. Carey; Danny Zeevi; Eilon Sharon; Leeat Keren; Adina Weinberger; Orna Dahan; Yitzhak Pilpel; Eran Segal (PLoS Comput. Biol., 2013)

A spatial vaccination strategy to reduce the risk of vaccine-resistant variants. - Xiyun Zhang; Gabriela Lobinska; Michal Feldman; Eddie Dekel; Martin A. Nowak; Yitzhak Pilpel; Yonatan Pauzner; Baruch Barzel; Ady Pauzner (PLoS Comput. Biol., 2022)

Correction: A spatial vaccination strategy to reduce the risk of vaccine-resistant variants. - Xiyun Zhang; Gabriela Lobinska; Michal Feldman; Eddie Dekel; Martin A. Nowak; Yitzhak Pilpel; Yonatan Pauzner; Baruch Barzel; Ady Pauzner (PLoS Comput. Biol., 2023)