Toward Efficient and End-to-End Privacy-Preserving Distributed Gradient Boosting Decision Trees. - Shuai Yuan 009; Hongwei Li 001; Xinyuan Qian 002; Meng Hao 001; Yixiao Zhai; Xiaolong Cui (ICC, 2023)

PlantCADB: A Comprehensive Plant Chromatin Accessibility Database. - Ke Ding; Shanwen Sun; Yang Luo; Chaoyue Long; Jingwen Zhai; Yixiao Zhai; Guohua Wang (Genom. Proteom. Bioinform., 2023)

FMAlign2: A novel fast multiple nucleotide sequence alignment method for ultralong datasets. - Pinglu Zhang; Huan Liu 024; Yanming Wei; Yixiao Zhai; Qinzhong Tian; Quan Zou 001 (Zenodo, 2023)

FORAlign: accelerating gap-affine DNA pairwise sequence alignment using FOR-blocks based on Four Russians approach with linear space complexity. - Yanming Wei; Tong Zhou 016; Yixiao Zhai; Liang Yu 002; Quan Zou 001 (Briefings Bioinform., 2024)

SBSM-Pro: support bio-sequence machine for proteins. - Yizheng Wang; Yixiao Zhai; Yijie Ding; Quan Zou 001 (Sci. China Inf. Sci., 2024)

TPMA: A two pointers meta-alignment tool to ensemble different multiple nucleic acid sequence alignments. - Yixiao Zhai; Jiannan Chao; Yizheng Wang; Pinglu Zhang; Furong Tang; Quan Zou 001 (PLoS Comput. Biol., 2024)

Efficient and Privacy-Preserving Outsourcing of Gradient Boosting Decision Tree Inference. - Shuai Yuan 009; Hongwei Li 001; Xinyuan Qian 002; Meng Hao 001; Yixiao Zhai; Guowen Xu (IEEE Trans. Serv. Comput., 2024)

FMAlign2: a novel fast multiple nucleotide sequence alignment method for ultralong datasets. - Pinglu Zhang; Huan Liu 024; Yanming Wei; Yixiao Zhai; Qinzhong Tian; Quan Zou 001 (Bioinform., 2024)

FORAlign: Accelerating gap-affine DNA pairwise sequence alignment using t-blocks based on FOur Russians approach with linear space complexity. - Yanming Wei; Tong Zhou 016; Yixiao Zhai; Liang Yu 002; Quan Zou 001 (Zenodo, 2024)

FORAlign: Accelerating gap-affine DNA pairwise sequence alignment using FOR-blocks based on FOur Russians approach with linear space complexity. - Yanming Wei; Tong Zhou 016; Yixiao Zhai; Liang Yu 002; Quan Zou 001 (Zenodo, 2024)

ReAlign-Star: An Optimized Realignment Method for Multiple Sequence Alignment, Targeting Star Algorithm Tools. - Yixiao Zhai; Pinglu Zhang; Yi Liu 112; Quan Zou 001 (ICIC (26), 2025)