SubGE-DDI: A new prediction model for drug-drug interaction established through biomedical texts and drug-pairs knowledge subgraph enhancement. - Yiyang Shi; Mingxiu He; Junheng Chen; Fangfang Han; Yongming Cai (PLoS Comput. Biol., 2024)

Echoes of Movement: A LINE User Geolocation Method Based on Probe Position Adaptive Adjustment. - Yiyang Shi; Wenqi Shi; Xiangyang Luo; Ruiting Liu; Bing Zhang; Junchao Cui (WoWMoM, 2025)

From Crowds to Coordinates: A user density-distance dynamic transformation method for Telegram users geolocalization. - Yiyang Shi; Xiangyang Luo; Wenqi Shi (Comput. Networks, 2025)

A novel weighted pseudo-labeling framework based on matrix factorization for adverse drug reaction prediction. - Junheng Chen; Fangfang Han; Mingxiu He; Yiyang Shi; Yongming Cai (BMC Bioinform., 2025)