A New Algorithm to Predict the Active Sites Using Amino Acid Vectors and Biochemical features of Surface Patches. - Sunshin Kim; Chung Rhee; Jungdo Choi; Yong Je Chung; Keun Ho Ryu (BIOCOMP, 2006)

Improved Prediction of Protein Secondary Structures Using Adaptively Weighted Profiles. - Gouchol Pok; Keun Ho Ryu; Yong Je Chung (APWeb/WAIM, 2007)

Investigating the binding area of protein surface using MCL algorithm. - Kwang Su Jung; Ki Jin Yu; Yong Je Chung; Keun Ho Ryu (CIT, 2008)

Analyzing Flexibilities of Lysozyme Mutations for Protein Surface Comparison with Structure Factor and Phase Angle. - Kwang Su Jung; Nam Hee Yu; Sang Yeob Kim; Wun-Jae Kim; Yong Je Chung; Keun Ho Ryu (BIOCOMP, 2009)

A Protein Sub-structure Comparison Method using Distance Matrix. - Nam Hee Yu; Kwang Su Jung; Yong Je Chung; Hi-Seok Kim; Keun Ho Ryu (BIOCOMP, 2009)