HYPE: A High Performing NLP System for Automatically Detecting Hypoglycemia Events from Electronic Health Record Notes. - Yonghao Jin; Fei Li 021; Hong Yu 001 (CoRR, 2018)

ATAC-pipe: general analysis of genome-wide chromatin accessibility. - Zuqi Zuo; Yonghao Jin; Wen Zhang; Yichen Lu; Bin Li; Kun Qu (Briefings Bioinform., 2019)

BENTO: A Visual Platform for Building Clinical NLP Pipelines Based on CodaLab. - Yonghao Jin; Fei Li 021; Hong Yu 001 (ACL (demo), 2020)

BENTO: A Visual Platform for Building Clinical NLP Pipelines Based on CodaLab. - Yonghao Jin; Fei Li; Hong Yu (AMIA, 2020)

Epinoter: A Natural Language Processing Tool for Epidemiological Studies. - Weisong Liu; Fei Li 021; Yonghao Jin; Edgard Granillo; Jorge Yarzebski; Wenjun Li; Hong Yu 001 (HEALTHINF, 2021)