scTenifoldKnk: An efficient virtual knockout tool for gene function predictions via single-cell gene regulatory network perturbation. - Daniel Osório 004; Yan Zhong 003; Guanxun Li; Qian Xu; Yongjian Yang 003; Yanan Tian; Robert S. Chapkin; Jianhua Z. Huang; James J. Cai (Patterns, 2022)

Interpretable modeling of time-resolved single-cell gene-protein expression with CrossmodalNet. - Yongjian Yang 003; Yu-Te Lin; Guanxun Li; Yan Zhong 003; Qian Xu; James J. Cai (Briefings Bioinform., 2023)