RaacFold: a webserver for 3D visualization and analysis of protein structure by using reduced amino acid alphabets. - Lei Zheng; Dongyang Liu; Yuan Alex Li; Siqi Yang; Yuchao Liang; Yongqiang Xing; Yongchun Zuo (Nucleic Acids Res., 2022)

EmAtlas: a comprehensive atlas for exploring spatiotemporal activation in mammalian embryogenesis. - Lei Zheng; Pengfei Liang; Chunshen Long; Haicheng Li; Hanshuang Li; Yuchao Liang; Xiang He; Qilemuge Xi; Yongqiang Xing; Yongchun Zuo (Nucleic Acids Res., 2023)

Cancer type and survival prediction based on transcriptomic feature map. - Ming Yan; Zirou Dong; Zhaopo Zhu; Chengliang Qiao; Meizhi Wang; Zhixia Teng; Yongqiang Xing; Guojun Liu; Guoqing Liu; Lu Cai; Hu Meng (Comput. Biol. Medicine, 2025)