The correlation error and finite-size correction in an ungapped sequence alignment. - Yonil Park; John L. Spouge (Bioinform., 2002)

Searching for Multiple Words in a Markov Sequence. - Yonil Park; John L. Spouge (INFORMS J. Comput., 2004)

Frameshift alignment: statistics and post-genomic applications. - Sergey L. Sheetlin; Yonil Park; Martin C. Frith; John L. Spouge (Bioinform., 2014)

ALP & FALP: C++ libraries for pairwise local alignment E-values. - Sergey Sheetlin; Yonil Park; Martin C. Frith; John L. Spouge (Bioinform., 2016)