RiceGAAS: an automated annotation system and database for rice genome sequence. - Katsumi Sakata; Yoshiaki Nagamura; Hisataka Numa; Baltazar A. Antonio; Hideki Nagasaki; Atsuko Idonuma; Wakako Watanabe; Yuji Shimizu; Ikuo Horiuchi; Takashi Matsumoto; Takuji Sasaki; Kenichi Higo (Nucleic Acids Res., 2002)

Rice Annotation Database (RAD): a contig-oriented database for map-based rice genomics. - Yuichi Ito; Kohji Arikawa; Baltazar A. Antonio; Isamu Ohta; Shinji Naito; Yoshiyuki Mukai; Atsuko Shimano; Masatoshi Masukawa; Michie Shibata; Mayu Yamamoto; Yukiyo Ito; Junri Yokoyama; et al. (Nucleic Acids Res., 2005)

The Rice Annotation Project Database (RAP-DB): hub for Oryza sativa ssp. japonica genome information. - Hajime Ohyanagi; Tsuyoshi Tanaka; Hiroaki Sakai; Yasumasa Shigemoto; Kaori Yamaguchi; Takuya Habara; Yasuyuki Fujii; Baltazar A. Antonio; Yoshiaki Nagamura; Tadashi Imanishi; Kazuho Ikeo; Takeshi Itoh; et al. (Nucleic Acids Res., 2006)

Self-organizing Clustering: Non-hierarchical Clustering for Large Scale DNA Sequence Data. - Kou Amano; Hiroaki Ichikawa; Hidemitsu Nakamura; Hisataka Numa; Kaoru Fukami-Kobayashi; Yoshiaki Nagamura; Natsuo Onodera (Inf. Media Technol., 2007)

RiceXPro: a platform for monitoring gene expression in japonica rice grown under natural field conditions. - Yutaka Sato; Baltazar A. Antonio; Nobukazu Namiki; Hinako Takehisa; Hiroshi Minami; Kaori Kamatsuki; Kazuhiko Sugimoto; Yuji Shimizu; Hirohiko Hirochika; Yoshiaki Nagamura (Nucleic Acids Res., 2011)

RiceFREND: a platform for retrieving coexpressed gene networks in rice. - Yutaka Sato; Nobukazu Namiki; Hinako Takehisa; Kaori Kamatsuki; Hiroshi Minami; Hiroshi Ikawa; Hajime Ohyanagi; Kazuhiko Sugimoto; Jun-ichi Itoh; Baltazar A. Antonio; Yoshiaki Nagamura (Nucleic Acids Res., 2013)

RiceXPro Version 3.0: expanding the informatics resource for rice transcriptome. - Yutaka Sato; Hinako Takehisa; Kaori Kamatsuki; Hiroshi Minami; Nobukazu Namiki; Hiroshi Ikawa; Hajime Ohyanagi; Kazuhiko Sugimoto; Baltazar A. Antonio; Yoshiaki Nagamura (Nucleic Acids Res., 2013)