Comparative Analysis of Transformation Methods for Gene Expression Profiles in Breast Cancer Datasets. - Yoshiaki Sota; Shigeto Seno; Yoichi Takenaka; Shinzaburo Noguchi; Hideo Matsuda (BIBE, 2016)

Detection of Fusion Genes from Human Breast Cancer Cell-Line RNA-Seq Data Using Shifted Short Read Clustering. - Yoshiaki Sota; Shigeto Seno; Hironori Shigeta; Naoki Osato; Masafumi Shimoda; Shinzaburo Noguchi; Hideo Matsuda (BIBE, 2018)

Improvement of detection performance of fusion genes from RNA-seq data by clustering short reads. - Yoshiaki Sota; Shigeto Seno; Hironori Shigeta; Naoki Osato; Masafumi Shimoda; Shinzaburo Noguchi; Hideo Matsuda (J. Bioinform. Comput. Biol., 2019)

A Novel Method for Fusion Gene Detection using Both End-Fragment Sequences of Long Reads. - Keigo Masuda; Yoshiaki Sota; Hideo Matsuda (ICBBE, 2022)

Accurate Detection of Fusion Genes in Long-Read Transcriptome Datasets from Multiple Cancer Cell Lines. - Keigo Masuda; Yoshiaki Sota; Hideo Matsuda (ICBBB, 2024)