A framework for protein structure classification and identification of novel protein structures. - You Jung Kim; Jignesh M. Patel (BMC Bioinform., 2006)

Rethinking Choices for Multi-dimensional Point Indexing: Making the Case for the Often Ignored Quadtree. - You Jung Kim; Jignesh M. Patel (CIDR, 2007)

Efficient Index-based Methods for Processing Large Biological Databases. - You Jung Kim (2008)

ProbeMatch: rapid alignment of oligonucleotides to genome allowing both gaps and mismatches. - You Jung Kim; Nikhil Teletia; Victor Ruotti; Christopher A. Maher; Arul M. Chinnaiyan; Ron M. Stewart; James A. Thomson; Jignesh M. Patel (Bioinform., 2009)

Performance Comparison of the R*-Tree and the Quadtree for kNN and Distance Join Queries. - You Jung Kim; Jignesh M. Patel (IEEE Trans. Knowl. Data Eng., 2010)

Dimensions Based Data Clustering and Zone Maps. - Mohamed Ziauddin; Andrew Witkowski; You Jung Kim; Janaki Lahorani; Dmitry Potapov; Murali Krishna (Proc. VLDB Endow., 2017)

Automated Clustering Recommendation With Database Zone Maps. - Suratna Budalakoti; Mohamed Ziauddin; Andrew Witkowski; You Jung Kim; Ramarajan Krishnamachari; Alan Wood (SIGMOD Conference Companion, 2024)