高解析度之國語類音素單元端點自動標示 (Sample-based Phone-like Unit Automatic Labeling in Mandarin Speech) [In Chinese]. - You-Yu Lin; Yih-Ru Wang (ROCLING, 2009)

Phone boundary detection using sample-based acoustic parameters. - You-Yu Lin; Yih-Ru Wang; Yuan-Fu Liao (INTERSPEECH, 2010)

De novo assembly of highly polymorphic metagenomic data using in situ generated reference sequences and a novel BLAST-based assembly pipeline. - You-Yu Lin; Chia-Hung Hsieh; Jiun-Hong Chen; Xuemei Lu; Jia-Horng Kao; Pei-Jer Chen; Ding-Shinn Chen; Hurng-Yi Wang (BMC Bioinform., 2017)