Preference of simple sequence repeats in coding and non-coding regions of Arabidopsis thaliana. - Lida Zhang; Dejun Yuan; Shunwu Yu; Zhugang Li; Youfang Cao; Zhiqi Miao; Hongmei Qian; Kexuan Tang (Bioinform., 2004)

Information theory-based algorithm for in silico prediction of PCR products with whole genomic sequences as templates. - Youfang Cao; Lianjie Wang; Kexue Xu; Chunhai Kou; Yulei Zhang 001; Guifang Wei; Junjian He; Yunfang Wang; Liping Zhao 003 (BMC Bioinform., 2005)

Prediction of protein structural class with Rough Sets. - Youfang Cao; Shi Liu; Lida Zhang; Jie Qin; Jiang Wang; Kexuan Tang (BMC Bioinform., 2006)

Optimal enumeration of state space of finitely buffered stochastic molecular networks and exact computation of steady state landscape probability. - Youfang Cao; Jie Liang 002 (BMC Syst. Biol., 2008)

Nonlinear Langevin model with product stochasticity for biological networks: The case of the Schnakenberg model. - Youfang Cao; Jie Liang (J. Syst. Sci. Complex., 2010)

Modeling spatial population dynamics of stem cell lineage in tissue growth. - Youfang Cao; Claire Liang; Hammad Naveed; Yingzi Li; Meng Chen; Qing Nie (EMBC, 2012)

Modeling spatial population dynamics of stem cell lineage in wound healing and cancerogenesis. - Youfang Cao; Hammad Naveed; Claire Liang; Jie Liang 002 (EMBC, 2013)

Dynamic mechanical finite element model of biological cells for studying cellular pattern formation. - Jieling Zhao; Hammad Naveed; Sema Kachalo; Youfang Cao; Wei Tian 003; Jie Liang 002 (EMBC, 2013)

Exact computation of probability landscape of stochastic networks of Single Input and Coupled Toggle Switch Modules. - Anna Terebus; Youfang Cao; Jie Liang 002 (EMBC, 2014)

Roles of regulated internalization in the polarization of cell surface receptors. - Wei Tian 003; Youfang Cao; Amber Ismael; David Stone; Jie Liang 002 (EMBC, 2014)

Mechanisms of stochastic focusing and defocusing in biological reaction networks: Insight from accurate Chemical Master Equation (ACME) solutions. - Gamze Giirsoy; Anna Terebus; Youfang Cao; Jie Liang 002 (EMBC, 2016)

Accurate Chemical Master Equation Solution Using Multi-Finite Buffers. - Youfang Cao; Anna Terebus; Jie Liang 002 (Multiscale Model. Simul., 2016)

Sensitivities of Regulation Intensities in Feed-Forward Loops with Multistability. - Anna Terebus; Youfang Cao; Jie Liang 002 (EMBC, 2019)

Mechanistic basis of post-treatment control of SIV after anti-α4β7 antibody therapy. - Chad R. Wells; Youfang Cao; David P. Durham; Siddappa N. Byrareddy; Aftab A. Ansari; Nancy H. Ruddle; Jeffrey P. Townsend; Alison P. Galvani; Alan S. Perelson (PLoS Comput. Biol., 2021)