Statistical modeling and optimization of resistance spot welding process parameters using neural networks and multi-objective genetic algorithm. - Hamed Pashazadeh; Yousof Gheisari; Mohsen Hamedi (J. Intell. Manuf., 2016)

Bifurcation analysis of a modular model of embryonic kidney development. - Niloofar Nickaeen; Jafar Ghaisari; Shiva Moein; Yousof Gheisari (Biosyst., 2020)

A deep learning approach to predict inter-omics interactions in multi-layer networks. - Niloofar Borhani; Jafar Ghaisari; Maryam Abedi; Marzieh Kamali; Yousof Gheisari (BMC Bioinform., 2022)

Discovering driver nodes in chronic kidney disease-related networks using Trader as a newly developed algorithm. - Yosef Masoudi-Sobhanzadeh; Alieh Gholaminejad; Yousof Gheisari; Amir Roointan (Comput. Biol. Medicine, 2022)

A novel strategy for dynamic modeling of genome-scale interaction networks. - Pooya Borzou; Jafar Ghaisari; Iman Izadi; Yasin Eshraghi; Yousof Gheisari (Bioinform., 2023)

DrugGen: Advancing Drug Discovery with Large Language Models and Reinforcement Learning Feedback. - Mahsa Sheikholeslami; Navid Mazrouei; Yousof Gheisari; Afshin Fasihi; Matin Irajpour; Ali Motahharynia (CoRR, 2024)