Efficient Scheduling of Rate Law Functions for ODE-Based Multimodel Biochemical Simulation on an FPGA. - Naoki Iwanaga; Yuichiro Shibata; Masato Yoshimi; Yasunori Osana; Yow Iwaoka; Tomonori Fukushima; Hideharu Amano; Akira Funahashi; Noriko Hiroi; Hiroaki Kitano; Kiyoshi Oguri (FPL, 2005)

A Framework for ODE-Based Multimodel Biochemical Simulations on an FPGA. - Yasunori Osana; Yow Iwaoka; Tomonori Fukushima; Masato Yoshimi; Akira Funahashi; Noriko Hiroi; Yuichiro Shibata; Naoki Iwanaga; Hiroaki Kitano; Hideharu Amano (FPL, 2005)

The Design of Scalable Stochastic Biochemical Simulator on FPGA. - Masato Yoshimi; Yasunori Osana; Yow Iwaoka; Akira Funahashi; Noriko Hiroi; Yuichiro Shibata; Naoki Iwanaga; Hiroaki Kitano; Hideharu Amano (FPT, 2005)

An FPGA-Based, Multi-model Simulation Method for Biochemical Systems. - Yasunori Osana; Tomonori Fukushima; Masato Yoshimi; Yow Iwaoka; Yuichiro Shibata; Hiroaki Kitano; Akira Funahashi; Noriko Hiroi; Hideharu Amano (IPDPS, 2005)

An FPGA Implementation of High Throughput Stochastic Simulator for Large-Scale Biochemical Systems. - Masato Yoshimi; Yasunori Osana; Yow Iwaoka; Yuri Nishikawa; Toshinori Kojima; Akira Funahashi; Noriko Hiroi; Yuichiro Shibata; Naoki Iwanaga; Hiroaki Kitano; Hideharu Amano (FPL, 2006)

A Combining technique of rate law functions for a cost-effective reconfigurable biological simulator. - Hideki Yamada; Naoki Iwanaga; Yuichiro Shibata; Yasunori Osana; Masato Yoshimi; Yow Iwaoka; Yuri Nishikawa; Toshinori Kojima; Hideharu Amano; Akira Funahashi; Noriko Hiroi; Hiroaki Kitano; et al. (FPL, 2007)

FPGA Implementation of a Data-Driven Stochastic Biochemical Simulator with the Next Reaction Method. - Masato Yoshimi; Yow Iwaoka; Yuri Nishikawa; Toshinori Kojima; Yasunori Osana; Akira Funahashi; Noriko Hiroi; Yuichiro Shibata; Naoki Iwanaga; Hideki Yamada; Hiroaki Kitano; Hideharu Amano (FPL, 2007)