Sequence-based prediction of protein-protein interaction sites by simplified long short-term memory network. - Buzhong Zhang; Jinyan Li 001; Lijun Quan; Yu Chen 064; Qiang Lü (Neurocomputing, 2019)

Developing parallel ant colonies filtered by deep learned constrains for predicting RNA secondary structure with pseudo-knots. - Lijun Quan; Leixin Cai; Yu Chen 064; Jie Mei; Xiaoyu Sun 006; Qiang Lyu (Neurocomputing, 2020)

Learning Useful Representations of DNA Sequences From ChIP-Seq Datasets for Exploring Transcription Factor Binding Specificities. - Lijun Quan; Xiaoyu Sun 006; Jian Wu; Jie Mei; Liqun Huang; Ruji He; Liangpeng Nie; Yu Chen 064; Qiang Lyu (IEEE ACM Trans. Comput. Biol. Bioinform., 2022)