Fast and robust deconvolution of tumor infiltrating lymphocyte from expression profiles using least trimmed squares. - Yuning Hao; Ming Yan 006; Blake R. Heath; Yu L. Lei; Yuying Xie 001 (PLoS Comput. Biol., 2019)

Supervised capacity preserving mapping: a clustering guided visualization method for scRNA-seq data. - Zhiqian Zhai; Yu L. Lei; Rongrong Wang; Yuying Xie 001 (Bioinform., 2022)

SpatialCTD: A Large-Scale Tumor Microenvironment Spatial Transcriptomic Dataset to Evaluate Cell Type Deconvolution for Immuno-Oncology. - Jiayuan Ding; Lingxiao Li; Qiaolin Lu; Julian Venegas; Yixin Wang; Lidan Wu; Wei Jin 009; Hongzhi Wen; Renming Liu; Wenzhuo Tang; Xinnan Dai; Zhaoheng Li; et al. (J. Comput. Biol., 2024)

Deep Learning in Single-cell Analysis. - Dylan Molho; Jiayuan Ding; Wenzhuo Tang; Zhaoheng Li; Hongzhi Wen; Yixin Wang; Julian Venegas; Wei Jin 009; Renming Liu; Runze Su; Patrick Danaher; Robert Yang; et al. (ACM Trans. Intell. Syst. Technol., 2024)

Multihead Attention U-Net for Magnetic Particle Imaging-Computed Tomography Image Segmentation. - Aniwat Juhong; Bo Li; Yifan Liu; Chia-Wei Yang; Cheng-You Yao; Dalen W. Agnew; Yu Leo Lei; Gary D. Luker; Harvey Bumpers; Xuefei Huang; Wibool Piyawattanametha; Zhen Qiu (Adv. Intell. Syst., 2024)