DeepHiC: A generative adversarial network for enhancing Hi-C data resolution. - Hao Hong; Shuai Jiang; Hao Li 035; Guifang Du; Yu Sun 070; Huan Tao; Cheng Quan; Chenghui Zhao; Ruijiang Li; Wanying Li; Xiaoyao Yin; Yangchen Huang; et al. (PLoS Comput. Biol., 2020)

Spatial density of open chromatin: an effective metric for the functional characterization of topologically associated domains. - Shuai Jiang; Hao Li 035; Hao Hong; Guifang Du; Xin Huang 005; Yu Sun 070; Junting Wang 003; Huan Tao; Kang Xu; Cheng Li; Yang Chen; Hebing Chen; et al. (Briefings Bioinform., 2021)

Graph Neural Networks for Double-Strand DNA Breaks Prediction. - Xu Wang; Huan Zhao 002; Weiwei Tu; Hao Li 035; Yu Sun 070; Xiaochen Bo (CoRR, 2022)

Inferring transcription factor regulatory networks from single-cell ATAC-seq data based on graph neural networks. - Hao Li 035; Yu Sun 070; Hao Hong; Xin Huang 005; Huan Tao; Qiya Huang; Longteng Wang; Kang Xu; Jingbo Gan; Hebing Chen; Xiaochen Bo (Nat. Mach. Intell., 2022)