Common introns within orthologous genes: software and application to plants. - Matthew D. Wilkerson; Yuanbin Ru; Volker Brendel (Briefings Bioinform., 2009)

SplicingTypesAnno: Annotating and quantifying alternative splicing events for RNA-Seq data. - Xiaoyong Sun; Fenghua Zuo; Yuanbin Ru; Jiqiang Guo; Xiaoyan Yan; Gaurav Sablok (Comput. Methods Programs Biomed., 2015)