TIGR Gene Indices clustering tools (TGICL): a software system for fast clustering of large EST datasets. - Geo Pertea; Xiaoqiu Huang 001; Feng Liang; Valentin Antonescu; Razvan Sultana; Svetlana Karamycheva; Yuandan Lee; Joseph White; Foo Cheung; Babak Parvizi; Jennifer Tsai; John Quackenbush (Bioinform., 2003)

Gene Recovery of Two Genome-Filtration Sequencing Techniques When Applied to the Maize Genome. - Xiequn Xu; William Bradley Barbazuk; Yucheng Feng; Karel Schubert; Agnes P. Chan; Geo Pertea; Li Zheng; Foo Cheung; Yuandan Lee (CSB, 2004)

The TIGR Gene Indices: clustering and assembling EST and known genes and integration with eukaryotic genomes. - Yuandan Lee; Jennifer Tsai; S. Sunkara; Svetlana Karamycheva; Geo Pertea; Razvan Sultana; Valentin Antonescu; Agnes P. Chan; Foo Cheung; John Quackenbush (Nucleic Acids Res., 2005)

The TIGR Rice Genome Annotation Resource: improvements and new features. - Shu Ouyang; Wei Zhu; John A. Hamilton Jr.; Haining Lin; Matthew Campbell; Kevin L. Childs; Françoise Thibaud-Nissen; Renae L. Malek; Yuandan Lee; Li Zheng; Joshua Orvis; Brian Haas; et al. (Nucleic Acids Res., 2007)