WebTraceMiner: a web service for processing and mining EST sequence trace files. - Chun Liang; Gang Wang; Lin Liu 001; Guoli Ji; Yuansheng Liu; Jinqiao Chen; Jason S. Webb; Greg J. Reese; Jeffrey F. D. Dean (Nucleic Acids Res., 2007)

Breaking a novel image encryption scheme based on improved hyperchaotic sequences - Chengqing Li; Yuansheng Liu; Tao Xie (CoRR, 2012)

Breaking an image compression and encryption scheme based on Chinese Remainder Theorem. - Chengqing Li; Yuansheng Liu; Leo Yu Zhang; Kwok-Wo Wong (CoRR, 2013)

Breaking a RGB image encryption algorithm based on DNA encoding and chaos map. - Yuansheng Liu (CoRR, 2013)

Breaking a Chaotic Image Encryption Algorithm Based on Modulo Addition and XOR Operation. - Chengqing Li; Yuansheng Liu; Leo Yu Zhang; Michael Z. Q. Chen (Int. J. Bifurc. Chaos, 2013)

A chaotic image encryption scheme owning temp-value feedback. - Leo Yu Zhang; Xiaobo Hu; Yuansheng Liu; Kwok-Wo Wong; Jie Gan (Commun. Nonlinear Sci. Numer. Simul., 2014)

Deciphering a novel image cipher based on mixed transformed Logistic maps. - Yuansheng Liu; Eric Yong Xie; Ge Cheng; Chengqing Li (CoRR, 2014)

Cryptanalyzing a class of image encryption schemes based on Chinese remainder theorem. - Chengqing Li; Yuansheng Liu; Leo Yu Zhang; Kwok-Wo Wong (Signal Process. Image Commun., 2014)

Chosen-plaintext attack of an image encryption scheme based on modified permutation-diffusion structure. - Yuansheng Liu; Leo Yu Zhang; Jia Wang 008; Yushu Zhang 001; Kwok-Wo Wong (CoRR, 2015)

Deciphering an Image Cipher Based on Mixed Transformed Logistic Maps. - Yuansheng Liu; Hua Fan; Eric Yong Xie; Ge Cheng; Chengqing Li (Int. J. Bifurc. Chaos, 2015)

Reliability Evaluation of the Minimum Spanning Tree on Uncertain Graph. - Jie Tang; Yuansheng Liu; Zhonghua Wen (J. Comput., 2015)

Cryptanalyzing an image encryption algorithm based on scrambling and Veginère cipher. - Li Zeng; Renren Liu; Leo Yu Zhang; Yuansheng Liu; Kwok-Wo Wong (Multim. Tools Appl., 2016)

Evaluating Data Resilience in CNNs from an Approximate Memory Perspective. - Yuanchang Chen; Yizhe Zhu; Fei Qiao; Jie Han 001; Yuansheng Liu; Huazhong Yang (ACM Great Lakes Symposium on VLSI, 2017)

High-speed and high-ratio referential genome compression. - Yuansheng Liu; Hui Peng; Limsoon Wong; Jinyan Li 001 (Bioinform., 2017)

Security Analysis of Some Diffusion Mechanisms Used in Chaotic Ciphers. - Leo Yu Zhang; Yushu Zhang 001; Yuansheng Liu; Anjia Yang; Guanrong Chen (Int. J. Bifurc. Chaos, 2017)

Inferring MicroRNA-Disease Associations by Random Walk on a Heterogeneous Network with Multiple Data Sources. - Yuansheng Liu; Xiangxiang Zeng; Zengyou He; Quan Zou 001 (IEEE ACM Trans. Comput. Biol. Bioinform., 2017)

Prediction and Validation of Disease Genes Using HeteSim Scores. - Xiangxiang Zeng; Yuanlu Liao; Yuansheng Liu; Quan Zou 001 (IEEE ACM Trans. Comput. Biol. Bioinform., 2017)

Distinction Between Ships and Icebergs in SAR Images Using Ensemble Loss Trained Convolutional Neural Networks. - Xiaocai Zhang; Yuansheng Liu; Yi Zheng 002; Zhixun Zhao; Jinyan Li 001; Yang Liu (Australasian Conference on Artificial Intelligence, 2018)

Improved known-plaintext attack to permutation-only multimedia ciphers. - Leo Yu Zhang; Yuansheng Liu; Cong Wang 001; Jiantao Zhou 001; Yushu Zhang 001; Guanrong Chen (Inf. Sci., 2018)

Research on Moving Target Tracking Algorithm Based on Lidar and Visual Fusion. - Xiaoxiao Guo; Yuansheng Liu; Qixue Zhong; Mengna Chai (J. Adv. Comput. Intell. Intell. Informatics, 2018)

Dynamic Obstacle Detection and Tracking Based on 3D Lidar. - Qixue Zhong; Yuansheng Liu; Xiaoxiao Guo; Lijun Ren (J. Adv. Comput. Intell. Intell. Informatics, 2018)

A Crowdsensing Based Analytical Framework for Perceptional Degradation of OTT Web Browsing. - Ke Li 003; Hai Wang; Xiaolong Xu; Yu Du; Yuansheng Liu; M. Omair Ahmad (Sensors, 2018)

On the Security of a Class of Diffusion Mechanisms for Image Encryption. - Leo Yu Zhang; Yuansheng Liu; Fabio Pareschi; Yushu Zhang 001; Kwok-Wo Wong; Riccardo Rovatti; Gianluca Setti (IEEE Trans. Cybern., 2018)

A Hybrid Loop Closure Detection Method Based on Lidar SLAM. - Mengna Chai; Yuansheng Liu (CIS, 2019)

Detection of Anomalous Traffic Patterns and Insight Analysis from Bus Trajectory Data. - Xiaocai Zhang; Xuan Zhang 010; Sunny Verma; Yuansheng Liu; Michael Blumenstein; Jinyan Li 001 (PRICAI (3), 2019)

Index suffix-prefix overlaps by (w, k)-minimizer to generate long contigs for reads compression. - Yuansheng Liu; Zu-Guo Yu; Marcel E. Dinger; Jinyan Li 001 (Bioinform., 2019)

Fast detection of maximal exact matches via fixed sampling of query K-mers and Bloom filtering of index K-mers. - Yuansheng Liu; Leo Yu Zhang; Jinyan Li 001 (Bioinform., 2019)

Improving GNSS Navigation and Control with Electronic Compass in Unmanned System. - Xi Han; Xiaolin Zhang; Yuansheng Liu (J. Adv. Comput. Intell. Intell. Informatics, 2019)

Data mining for high performance compression of genmoic reads and sequences - Yuansheng Liu (2019)

Research on the Application of Semantic Segmentation of driverless vehicles in Park Scene. - Lijun Ren; Yuansheng Liu (ISCID, 2020)

Allowing mutations in maximal matches boosts genome compression performance. - Yuansheng Liu; Limsoon Wong; Jinyan Li 001 (Bioinform., 2020)

Bi-Level Error Correction for PacBio Long Reads. - Yuansheng Liu; Chaowang Lan; Michael Blumenstein; Jinyan Li 001 (IEEE ACM Trans. Comput. Biol. Bioinform., 2020)

A deep learning ensemble approach to prioritize antiviral drugs against novel coronavirus SARS-CoV-2 for COVID-19 drug repurposing. - Deepthi K. 001; Jereesh A. S. 001; Yuansheng Liu (Appl. Soft Comput., 2021)

Molecular design in drug discovery: a comprehensive review of deep generative models. - Yu Cheng; Yongshun Gong; Yuansheng Liu; Bosheng Song; Quan Zou 001 (Briefings Bioinform., 2021)

Deep learning methods for biomedical named entity recognition: a survey and qualitative comparison. - Bosheng Song; Fen Li; Yuansheng Liu; Xiangxiang Zeng (Briefings Bioinform., 2021)

Minirmd: accurate and fast duplicate removal tool for short reads via multiple minimizers. - Yuansheng Liu; Xiaocai Zhang; Quan Zou 001; Xiangxiang Zeng (Bioinform., 2021)

Instance-based error correction for short reads of disease-associated genes. - Xuan Zhang 010; Yuansheng Liu; Zuguo Yu; Michael Blumenstein; Gyorgy Hutvagner; Jin-Yan Li 001 (BMC Bioinform., 2021)

Future vehicles: interactive wheeled robots. - Nan Ma; Deyi Li; Wen He; Yue Deng; Jiahong Li; Yue Gao 002; Hong Bao; Huan Zhang; Xinkai Xu 001; Yuansheng Liu; Zhixuan Wu; Li Chen (Sci. China Inf. Sci., 2021)

Deep learning detection of anomalous patterns from bus trajectories for traffic insight analysis. - Xiaocai Zhang; Yi Zheng 002; Zhixun Zhao; Yuansheng Liu; Michael Blumenstein; Jinyan Li 001 (Knowl. Based Syst., 2021)

Hamming-shifting graph of genomic short reads: Efficient construction and its application for compression. - Yuansheng Liu; Jinyan Li (PLoS Comput. Biol., 2021)

Vision localization method for intelligent vehicles in low-texture environments. - Zijian Liu; Bingfeng Zhang; Cheng Xu 005; Yuansheng Liu; Jun Zhang (CIS, 2022)

Deep learning in retrosynthesis planning: datasets, models and tools. - Jingxin Dong 002; Mingyi Zhao; Yuansheng Liu; Yansen Su; Xiangxiang Zeng (Briefings Bioinform., 2022)

Learning spatial structures of proteins improves protein-protein interaction prediction. - Bosheng Song; Xiaoyan Luo; Xiaoli Luo; Yuansheng Liu; Zhangming Niu; Xiangxiang Zeng (Briefings Bioinform., 2022)

Deep learning joint models for extracting entities and relations in biomedical: a survey and comparison. - Yansen Su; Minglu Wang; Pengpeng Wang; Chunhou Zheng 001; Yuansheng Liu; Xiangxiang Zeng (Briefings Bioinform., 2022)

Predicting ncRNA-protein interactions based on dual graph convolutional network and pairwise learning. - Linlin Zhuo; Bosheng Song; Yuansheng Liu; Zejun Li; Xiangzheng Fu (Briefings Bioinform., 2022)

A factor graph optimization mapping based on normaldistributions transform. - Kedi Zhong; Yuansheng Liu; Jiansuo Yang; Ming Lu; Jun Zhang (Turkish J. Electr. Eng. Comput. Sci., 2022)

Multi-information fingerprint identification method based on interactive genetic algorithm. - Yuansheng Liu (Int. J. Biom., 2022)

High-Precision and Fast LiDAR Odometry and Mapping Algorithm. - Qingshan Wang; Jun Zhang; Yuansheng Liu; Xinchen Zhang (J. Adv. Comput. Intell. Intell. Informatics, 2022)

Research on Intelligent Monitoring Method of Medicine Delivery Vehicle Based on Internet of Things Technology. - Xiaomin Chen; Xi Han; Yuansheng Liu (DSA, 2023)

Fine-grained Urban Flow Inference with Unobservable Data via Space-Time Attraction Learning. - Ruifeng Wang; Yuansheng Liu; Yongshun Gong; Wei Liu 007; Meng Chen 003; Yilong Yin; Yu Zheng 004 (ICDM, 2023)

GPMO: Gradient Perturbation-Based Contrastive Learning for Molecule Optimization. - Xixi Yang; Li Fu; Yafeng Deng; Yuansheng Liu; Dongsheng Cao 001; Xiangxiang Zeng (IJCAI, 2023)

Modality-DTA: Multimodality Fusion Strategy for Drug-Target Affinity Prediction. - Xixi Yang; Zhangming Niu; Yuansheng Liu; Bosheng Song; Weiqiang Lu; Li Zeng; Xiangxiang Zeng (IEEE ACM Trans. Comput. Biol. Bioinform., 2023)

Machine learning on protein-protein interaction prediction: models, challenges and trends. - Tao Tang; Xiaocai Zhang; Yuansheng Liu; Hui Peng; Binshuang Zheng; Yanlin Yin; Xiangxiang Zeng (Briefings Bioinform., 2023)

Dimensionality reduction and visualization of single-cell RNA-seq data with an improved deep variational autoencoder. - Jing Jiang; Junlin Xu; Yuansheng Liu; Bosheng Song; Xiulan Guo; Xiangxiang Zeng; Quan Zou 001 (Briefings Bioinform., 2023)

Evolutionary Multi-Objective Optimization in Searching for Various Antimicrobial Peptides [Feature]. - Yiping Liu; Xinyi Zhang; Yuansheng Liu; Yansen Su; Xiangxiang Zeng; Gary G. Yen (IEEE Comput. Intell. Mag., 2023)

Sequence Alignment/Map format: a comprehensive review of approaches and applications. - Yuansheng Liu; Xiangzhen Shen; Yongshun Gong; Yiping Liu; Bosheng Song; Xiangxiang Zeng (Briefings Bioinform., 2023)

Prediction of multi-relational drug-gene interaction via Dynamic hyperGraph Contrastive Learning. - Wen Tao; Yuansheng Liu; Xuan Lin; Bosheng Song; Xiangxiang Zeng (Briefings Bioinform., 2023)

Optimal protospacer sequences recommended by ensemble deep learning for high-efficiency base editing. - Hui Peng; Xiaocai Zhang; Yuansheng Liu; Yi Pan 001; Wilson Wen Bin Goh; Jinyan Li (BCB, 2024)

Semantic Segmentation Method for Drivable Areas under Unstructured Road. - Ting Zhang; Yuansheng Liu (ICCVIT, 2024)

Pedestrian Detection Method Based on Fusion of LIDAR and Camera. - Yangyang Fan; Yuansheng Liu (QRS Companion, 2024)

MRM-LOOP: A Dynamic Visual Loop Closure Detection Algorithm Based on Motion Region Matching. - Zhiming Zhang; Jun Zhang; Yuansheng Liu (QRS Companion, 2024)

SSR-DTA: Substructure-aware multi-layer graph neural networks for drug-target binding affinity prediction. - Yuansheng Liu; Xinyan Xia; Yongshun Gong; Bosheng Song; Xiangxiang Zeng (Artif. Intell. Medicine, 2024)

Co-training based prediction of multi-label protein-protein interactions. - Tao Tang; Xiaocai Zhang; Weizhuo Li; Qing Wang; Yuansheng Liu; Xiaofeng Cao (Comput. Biol. Medicine, 2024)

DualSyn: A dual-level feature interaction method to predict synergistic drug combinations. - Zehui Chen; Zimeng Li; Xiangzhen Shen; Yuansheng Liu; Xuan Lin; Daojian Zeng; Xiangxiang Zeng (Expert Syst. Appl., 2024)

Effective drug-target affinity prediction via generative active learning. - Yuansheng Liu; Zhenran Zhou; Xiaofeng Cao; Dongsheng Cao 001; Xiangxiang Zeng (Inf. Sci., 2024)

Knowledge-based Dual External Attention Network for peptide detectability prediction. - Xiaocai Zhang; Hui Peng; Tao Tang; Yuansheng Liu; Yang Wang 002; Jianjia Zhang (Knowl. Based Syst., 2024)

scCAN: Clustering With Adaptive Neighbor-Based Imputation Method for Single-Cell RNA-Seq Data. - Shujie Dong; Yuansheng Liu; Yongshun Gong; Xiangjun Dong 001; Xiangxiang Zeng (IEEE ACM Trans. Comput. Biol. Bioinform., 2024)

Dynamic threshold spiking neural P systems with weights and multiple channels. - Yanyan Li; Bosheng Song; Yuansheng Liu; Xiangxiang Zeng; Shengye Huang (Theor. Comput. Sci., 2024)

PEB-DDI: A Task-Specific Dual-View Substructural Learning Framework for Drug-Drug Interaction Prediction. - Xiangzhen Shen; Zimeng Li; Yuansheng Liu; Bosheng Song; Xiangxiang Zeng (IEEE J. Biomed. Health Informatics, 2024)

Multi-Objective Molecular Design Through Learning Latent Pareto Set. - Yiping Liu; Jiahao Yang; Xuanbai Ren; Xinyi Zhang; Yuansheng Liu; Bosheng Song; Xiangxiang Zeng; Hisao Ishibuchi (AAAI, 2025)

FusionReg: LiDAR-Camera Fusion Regression Enhancement for 3D Object Detection. - Rongchun Xiao; Yuansheng Liu; Jun Zhang; Yanliang Huang; Xi Han (IEICE Trans. Inf. Syst., 2025)

Image-based generation for molecule design with SketchMol. - Zixu Wang; Yangyang Chen 006; Pengsen Ma; Zhou Yu; Jianmin Wang 016; Yuansheng Liu; Xiucai Ye; Tetsuya Sakurai; Xiangxiang Zeng (Nat. Mac. Intell., 2025)

Tasting emotions: An in-depth fmri study exploring gustatory and visual cross-modal associations across various spatio-temporal regions of the human brain. - Jie Chen; Yuansheng Liu; Lina Huang; Luming Hu; Xueying Li; Liuqing Wei; Weiping Yang; Simin Zhao; Xize Jia; Soumyajit Roy; Qingguo Ding; Pei Liang (NeuroImage, 2025)

AdaptMol: Adaptive Fusion from Sequence String to Topological Structure for Few-shot Drug Discovery. - Yifan Dai; Xuanbai Ren; Tengfei Ma 002; Qipeng Yan; Yiping Liu; Yuansheng Liu; Xiangxiang Zeng (CoRR, 2025)

Deep Generative Models for Therapeutic Peptide Discovery: A Comprehensive Review. - Leshan Lai; Yuansheng Liu; Bosheng Song; Keqin Li 001; Xiangxiang Zeng (ACM Comput. Surv., 2025)

How to Make Large Language Models Generate 100% Valid Molecules? - Wen Tao; Jing Tang 004; Alvin Chan; Bryan Hooi; Baolong Bi; Nanyun Peng 001; Yuansheng Liu; Yiwei Wang 001 (CoRR, 2025)