Prediction of novel pre-microRNAs with high accuracy through boosting and SVM. - Yuanwei Zhang; Yifan Yang 001; Huan Zhang; Xiaohua Jiang; Bo Xu; Yu Xue 001; Yunxia Cao; Qian Zhai; Yong Zhai; Mingqing Xu; Howard J. Cooke; Qinghua Shi (Bioinform., 2011)

CPSS: a computational platform for the analysis of small RNA deep sequencing data. - Yuanwei Zhang; Bo Xu; Yifan Yang 001; Rongjun Ban; Huan Zhang; Xiaohua Jiang; Howard J. Cooke; Yu Xue 001; Qinghua Shi (Bioinform., 2012)

SpermatogenesisOnline 1.0: a resource for spermatogenesis based on manual literature curation and genome-wide data mining. - Yuanwei Zhang; Liangwen Zhong; Bo Xu; Yifan Yang 001; Rongjun Ban; Jun Zhu; Howard J. Cooke; QiaoMei Hao; Qinghua Shi (Nucleic Acids Res., 2013)

Follicle Online: an integrated database of follicle assembly, development and ovulation. - Juan Hua; Bo Xu; Yifan Yang 001; Rongjun Ban; Furhan Iqbal; Howard J. Cooke; Yuanwei Zhang; Qinghua Shi (Database J. Biol. Databases Curation, 2015)

DeAnnCNV: a tool for online detection and annotation of copy number variations from whole-exome sequencing data. - Yuanwei Zhang; Zhenhua Yu 002; Rongjun Ban; Huan Zhang; Furhan Iqbal; Aiwu Zhao; Ao Li 001; Qinghua Shi (Nucleic Acids Res., 2015)

IsomiR Bank: a research resource for tracking IsomiRs. - Yuanwei Zhang; Qiguang Zang; Bo Xu; Wei Zheng; Rongjun Ban; Huan Zhang; Yifan Yang 001; QiaoMei Hao; Furhan Iqbal; Ao Li 001; Qinghua Shi (Bioinform., 2016)

DeAnnIso: a tool for online detection and annotation of isomiRs from small RNA sequencing data. - Yuanwei Zhang; Qiguang Zang; Huan Zhang; Rongjun Ban; Yifan Yang 001; Furhan Iqbal; Ao Li 001; Qinghua Shi (Nucleic Acids Res., 2016)

CPSS 2.0: a computational platform update for the analysis of small RNA sequencing data. - Changlin Wan; Jianing Gao; Huan Zhang; Xiaohua Jiang; Qiguang Zang; Rongjun Ban; Yuanwei Zhang; Qinghua Shi (Bioinform., 2017)

Anaconda: AN automated pipeline for somatic COpy Number variation Detection and Annotation from tumor exome sequencing data. - Jianing Gao; Changlin Wan; Huan Zhang; Ao Li 001; Qiguang Zang; Rongjun Ban; Asim Ali; Zhenghua Yu; Qinghua Shi; Xiaohua Jiang; Yuanwei Zhang (BMC Bioinform., 2017)

IsopiRBank: a research resource for tracking piRNA isoforms. - Huan Zhang; Asim Ali; Jianing Gao; Rongjun Ban; Xiaohua Jiang; Yuanwei Zhang; Qinghua Shi (Database J. Biol. Databases Curation, 2018)

SimuSCoP: reliably simulate Illumina sequencing data based on position and context dependent profiles. - Zhenhua Yu 002; Fang Du; Rongjun Ban; Yuanwei Zhang (BMC Bioinform., 2020)

Facilitating Text Entry on Smartphones with QWERTY Keyboard for Users with Parkinson's Disease. - Yuntao Wang 001; Ao Yu; Xin Yi 001; Yuanwei Zhang; Ishan Chatterjee; Shwetak N. Patel; Yuanchun Shi (CHI, 2021)

PedMiner: a tool for linkage analysis-based identification of disease-associated variants using family based whole-exome sequencing data. - Jianteng Zhou; Jianing Gao; Huan Zhang; Daren Zhao; Ao Li 001; Furhan Iqbal; Qinghua Shi; Yuanwei Zhang (Briefings Bioinform., 2021)

EnergyHair: Sketch-Based Interactive Guide Hair Design Using Physics-Inspired Energy. - Yuanwei Zhang; Shinichi Kinuwaki; Nobuyuki Umetani (Graphics Interface, 2022)

FertilityOnline: A Straightforward Pipeline for Functional Gene Annotation and Disease Mutation Discovery. - Jianing Gao; Huan Zhang; Xiaohua Jiang; Asim Ali; Daren Zhao; Jianqiang Bao; Long Jiang; Furhan Iqbal; Qinghua Shi; Yuanwei Zhang (Genom. Proteom. Bioinform., 2022)

Fast and Provable Tensor-Train Format Tensor Completion via Precondtioned Riemannian Gradient Descent. - Fengmiao Bian; Jian-Feng Cai 001; Xiaoqun Zhang; Yuanwei Zhang (CoRR, 2025)